Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4565 |
Symbol | |
ID | 8667859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5081337 |
End bp | 5082299 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | serine/threonine dehydratase |
Protein accession | YP_003340170 |
Protein GI | 271965974 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.026373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTGT CACCGACCTT TGACGACGTC CGGAGCGCTG CCGCCCGCAT CACGCCGCAC GCCCACCGCA CCCCGGTGCT GCGCTCACGC CGGATCAACG AGCAGGTCGG CGCCGACGTG GTGTTCAAGT GCGAGAACTT CCAGCGCATG GGCGCCTTCA AGTTCCGCGG CGCGTTCAAC GCCCTGTCGC GGTTCACCTC CGAGCAGCGG CGCGCCGGCG TGGTCGCCTA CTCCTCGGGC AACCACGCCC AGGCGATCGC CCTGGCCGCC CGGCTGCTGG ACATCCCGGC CACGCTCGTC ATGCCACACG ACGCGCCGGC CGCGAAGGTG GCCGCCACCA AGGGGTACGG CGGGCAGGTC GTCACCTACG ACCGCTACAC CGAGGACCGG GAGGAGATCG GCCGCGCCCT GGCCGCCGAC CGGGGCCTCA CGCTGATCCC GCCCTACGAC CACCCTCACG TGATCGCCGG TCAGGGCACC GCCGCCAAGG AGCTGTTCGA GGAGGTCGGC GATCTCGACG CGATCTTCGT GCCTCTCGGC GGCGGCGGGC TGCTCTCCGG CACGGCGCTG TCGGCCCGGG AGCTCTCGCC TGGCTGCGAG CTGTACGGCG TCGAACCCGA AGCCGGAGAC GACGGCCGGC GGTCCCTGCG CCAGGGGGCG ATCGTCCACA TCGACACCCC GGCGACCATC GCCGACGGCG CGCAGACCCA GCACCTCGGC GCCCACACCT TCGAGATCAT CCGCCGCGAG GTCGACGACA TCCTCACCGT CACCGACAGC GAACTCGTCG AATGCATGCG GATCTTCGGG TCGGTCATGA AGATCGTCGT CGAGCCCACC GGATGCCTCG GGTTCGCCGC CGTCCGCAAA CTCGCCCCGC GGCTGCGAGG CGGGCGGGTC GGTGTGATCG TCAGCGGCGG CAACGTCGAC CTCGACCGCT TCGTGTCGCT GCTGGCCTCA TGA
|
Protein sequence | MSLSPTFDDV RSAAARITPH AHRTPVLRSR RINEQVGADV VFKCENFQRM GAFKFRGAFN ALSRFTSEQR RAGVVAYSSG NHAQAIALAA RLLDIPATLV MPHDAPAAKV AATKGYGGQV VTYDRYTEDR EEIGRALAAD RGLTLIPPYD HPHVIAGQGT AAKELFEEVG DLDAIFVPLG GGGLLSGTAL SARELSPGCE LYGVEPEAGD DGRRSLRQGA IVHIDTPATI ADGAQTQHLG AHTFEIIRRE VDDILTVTDS ELVECMRIFG SVMKIVVEPT GCLGFAAVRK LAPRLRGGRV GVIVSGGNVD LDRFVSLLAS
|
| |