Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4561 |
Symbol | |
ID | 8667855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5077443 |
End bp | 5078378 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003340167 |
Protein GI | 271965971 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0028561 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0291759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCA CGTCGAAGGT CGCCGCCTTG CGCGGCGGAC ACGTCACTCT CGCCGCGGCC GCCGACGCCT TCCTGTCCAC CCCGCGCACG GCCAACACCC ACCGCGCCTA CGCCTCCGCC ATCGACCGCA CCATCGCGCT GCTCGGCCGC GACCGGCCAC TCGCCGACGT CGCCGACGCC GAGATCGGCG CCGCGCTCAC CGAGCTGTGG TGGGCGAGCG CGCCGGCGAC CTGGAACCGC AACCGCGCGG CCGTCGCCTC GTGGCTGTCC TGGTGTCACA CCAAGAAGCA CTGGGCCGCA CCCTCGGTCC CGGCCGACGC CGAACGCCGC AAGGAAACCG CCGACGAGAC CCGCGCCGTG GCCAAGACCA CGATCCGCCG GCTGCTGTCG CGCCGCGACA TCCCGCTCCG GGAGAAGACG CTGTGGCGGA TGCTCTACGA GACCGCGGCC CGGGCCGCCG AGATCCTGGC GCTGAACGTC GAGGACCTGG ACCTGGAGCA CCGGCGTGCC CCCGTCCGTT CCAAGGGTGG CGCCGTCGAG TGGGTGTACT GGGACAGCGA GACCGCCCAC CTGCTGCCTC GCCTGCTCTG CCTCCCCGAC GGCACGTCTC GCACCCGCGG CCCGCTGTTC CTGTCCGAAC GGCGCCCCGT CCCGGCCCGC CGCCCGGCCG CCAGCGACAT CTGCCCGCAT ACCGGCCGCG CCCGGCTCGG CTACGACCGC GCCCGCGTCC TGCTCGACAA GCACGCCGGA CTCGATCTGC ACCAGCTGCG CCACAGCGCC GCCACCCACC TCGGCGACGC CGAGGTCCCG CTCCAGCTCA TCATGGGCAA GACCCGCCAC AAGAACCCCC GCACCGCCAT GCGCTACGTC AAACCCGGCG CCGAAGCCAT CGCCAAGGTC ACCGAGCACC TCGCCCCGCC CCGCCGCCAG CACTGA
|
Protein sequence | MSATSKVAAL RGGHVTLAAA ADAFLSTPRT ANTHRAYASA IDRTIALLGR DRPLADVADA EIGAALTELW WASAPATWNR NRAAVASWLS WCHTKKHWAA PSVPADAERR KETADETRAV AKTTIRRLLS RRDIPLREKT LWRMLYETAA RAAEILALNV EDLDLEHRRA PVRSKGGAVE WVYWDSETAH LLPRLLCLPD GTSRTRGPLF LSERRPVPAR RPAASDICPH TGRARLGYDR ARVLLDKHAG LDLHQLRHSA ATHLGDAEVP LQLIMGKTRH KNPRTAMRYV KPGAEAIAKV TEHLAPPRRQ H
|
| |