Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4393 |
Symbol | |
ID | 8667687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4903660 |
End bp | 4904445 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003340012 |
Protein GI | 271965816 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0262444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0594228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATG ACACAAGTGA GGACTGGCCG CGCCATCCGG GCCTGGCCGG CAAGGTCGCG CTGGTGACCG GCGGCTCGCG CGGAATCGGT GCGGCGACCT GCCGGGCACT GGCGGCCAAC GGGGTCGCGG TCGCGGTGAA CGGCCGCGAC CGGGCGGCGA TCGACGAGGT CGTCGCACAG ATCGCGGCGG AAGGCGGCAC GGCGGTGGCG GCGCCCGGTG ACGTCACCGA CGAGGCCACG GTGCGGAACG TGCGCGCCAC GGTCGAGCGT GCGCTGGGAC CGGTGGAGAT CCTCGCGGCG TTCGCCGGTG GCCAGGGCGC CCCGGCGCCC ACCGTCCAGC TCGGGCTCGA CCGGTGGCGC GCGGTCGTCG AGTCCGAGCT GACCTCGGTC TACCTGACCG TGACCGCGTT CCTGCCTGCC ATGATCGAGC GAGGGGAGGG GACGATCATC ACCATGTCCT CCGCGGCCGG CCGCCGGCCG GGCGGCGCGA ACGCCGCGTA CGCCGCGGCG AAGGCCGGCG TGGTGATGTT CACCAAGCAT CTGGCGAACG AGGTCGGCAA GCAGGGCGTC CGCGTCAACT GCCTGGCTCC CTCCGCCGTG CTCAACGAGC GGATGCAGCG GTTCATGTCC GCCGGGCAGC TGGACGAGCT GGCCGCGACC CACCCCCTCG GCCGGATCGG GCGGCCCGGC GACGTCGCCC AGGCGGTGCT GTACCTCGTC TCGGACGCCT CGTCCTGGGT CACCGGGGTC ACCCTCGACC TGGCCGGCGG GCGGGTGATC GTGTGA
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Protein sequence | MSDDTSEDWP RHPGLAGKVA LVTGGSRGIG AATCRALAAN GVAVAVNGRD RAAIDEVVAQ IAAEGGTAVA APGDVTDEAT VRNVRATVER ALGPVEILAA FAGGQGAPAP TVQLGLDRWR AVVESELTSV YLTVTAFLPA MIERGEGTII TMSSAAGRRP GGANAAYAAA KAGVVMFTKH LANEVGKQGV RVNCLAPSAV LNERMQRFMS AGQLDELAAT HPLGRIGRPG DVAQAVLYLV SDASSWVTGV TLDLAGGRVI V
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