Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4019 |
Symbol | |
ID | 8667313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4472939 |
End bp | 4474594 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene -1-carboxylic-acidsynthase |
Protein accession | YP_003339670 |
Protein GI | 271965474 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.207997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0874374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCCG CCACCGCGCT CGCGACGGTG CTGATCGACG AGCTCGTGCG CTGCGGCCTT ACGGATGTGG TCCTCGCGCC CGGCTCACGC TCGGCCCCGC TGGCCCTGGC CGTCCACGCC GACAGCCGGA TCCGGCTGCA CGTGCGCGTC GACGAGCGCT CGGCCTCCTT CCTCGCGCTG GGCCTGGCCC GGCGCGGCGA GCGCCCGGTC GCCCTGATCT GCACCTCCGG CACCGCGGCC GCGAACTTCC ACCCGGCGGT CATCGAGGCG CACGAGTCGG GGGTGCCGCT GCTGCTGCTG ACCGCCGACC GGCCGCCCGA GCTGCGCGAC ACCGGCGCCA GCCAGACCAT CGACCAGATC AAGCTGTACG GTACGGCGGT CCGCTGGTTC AGCGAGGTCG GCCTGCCCGA GGACCGTCCC GGCCAGGTCG CCTACTGGCG GTCGCTGGCC TGCCGCGCCT ACCAGCGCTC GCTGGGCCCG ACCGACCCCG GCCCGGTCCA GCTGAACCTG TCCTTCCGCG AGCCGCTGAT CCCCGACGGC GACGCCTCCT GGTGCGAGTC CCTGGAGGGT GACGCCAACG GGCCCTGGAT CCGGGCCCGG GTGGCGCCCC CCGCGGTGGC GCTGCACCTG CCGCCGACCC GGCGGGGCGT GCTGGTCGTC GGCGACGGCG CCTCCAACGT GCGCAGATAC GTCGCGGCGG CGGGCATGGC CGGCTGGCCG GTCCTGTCGG AGCCGAACGG CGGCGCCCGC TACGGCGACC ACGCAATGTC GACCTACCAC TTCCTGCTCG GCACCCCCGA GTTCGCCGAC CGGCACCGGC CCGAGCTGGT GGTCACCCTG GGCCGCCCGG GCCTGTCCCG GTCGCTGCTG AACTGGCTGA GGCACGCCGA CGAGCACATC GTGGTCGCCC CCGACCTGAC CCGCTGGCCC GACCCGACCC GCTCGGCCAC CCAGGTGGCG CAGGCGGTGG AGATCCCGGT CGCGGCCGGC GACGACGCCT GGCTGCACTC CTGGCGCCGC GCCGACAACG CGGCCAGGGC CGCGATCGAC GAGGTGCTGG ACGGCGCCGG GCTCAGCGAG CCGCGCCTGG CCCGCGACCT GGTGGACATG CTGCCCAACG GGTCGCTGCT GTTCTCCGGC TCCTCCATGC CCATCCGCGA CCTGGACCAG GCGATGCGCC CCCGCAGGGG CCTGCGGATC CTGGCCAACC GGGGCACCGC CGGGATCGAC GGCGTGGTCT CCACCGCGAT GGGCGCGGCC CTGGCGCACA ACGGCCCCGC CTACGCGCTG ATGGGCGACC TGACCTTCCT GCACGACCAG AACGGGTTAA TCCTCGGCCC CCGCGAGCCC CGCCCCGACC TGTGCGTGGT CGTGGTGAAC AACGACGGCG GCGGGATCTT CTCGCTGCTG CCCCAGGCCG CGCTGCGCGA CCCGTTCGAG CGGGTCTTCG GCACCGCGCA CGGGGTGGAC CTGGCCCACG TGGCCGCCGC CACCGGCACT CCGTACACCT TCGTCAGCGA GCCCGACCAG CTCTCCAAGG CGCTGCGCGG GGAGGGGCTG CGGATCGTCG AGGTCCGCAG CGACCGGGAG TCCAACGCGG TCCTGCACGC CATGATGCGC GACGCCGCCC ACGCCGCGAT CCGCGAGGTC ATGTGA
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Protein sequence | MNPATALATV LIDELVRCGL TDVVLAPGSR SAPLALAVHA DSRIRLHVRV DERSASFLAL GLARRGERPV ALICTSGTAA ANFHPAVIEA HESGVPLLLL TADRPPELRD TGASQTIDQI KLYGTAVRWF SEVGLPEDRP GQVAYWRSLA CRAYQRSLGP TDPGPVQLNL SFREPLIPDG DASWCESLEG DANGPWIRAR VAPPAVALHL PPTRRGVLVV GDGASNVRRY VAAAGMAGWP VLSEPNGGAR YGDHAMSTYH FLLGTPEFAD RHRPELVVTL GRPGLSRSLL NWLRHADEHI VVAPDLTRWP DPTRSATQVA QAVEIPVAAG DDAWLHSWRR ADNAARAAID EVLDGAGLSE PRLARDLVDM LPNGSLLFSG SSMPIRDLDQ AMRPRRGLRI LANRGTAGID GVVSTAMGAA LAHNGPAYAL MGDLTFLHDQ NGLILGPREP RPDLCVVVVN NDGGGIFSLL PQAALRDPFE RVFGTAHGVD LAHVAAATGT PYTFVSEPDQ LSKALRGEGL RIVEVRSDRE SNAVLHAMMR DAAHAAIREV M
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