Gene Sros_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4004 
Symbol 
ID8667298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4460169 
End bp4460630 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content65% 
IMG OID 
Productprotein of unknown function DUF151 
Protein accessionYP_003339655 
Protein GI271965459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.688832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.959815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTCG TGGGCGTTCG GGTTGAGATG CCCTCCAACC AGCCAATTGT TCTGCTGAAG 
GAGGCACATG GGGAGCGTTA CCTGCCGATC TGGATCGGCA TGACGGAGGC GACGGCGATC
GCCATGGCCC AGGCCGAGGA GCCGCCGCCG CGGCCGCTCA CTCACGACCT GTTCCGTGAC
GTGCTCGACG CGCTCGGCGT CCGGCTGAGC ACGGTGAACA TCGTGGCCCT CCGTGACGGG
ATCTTCTTCG CCGACCTCGT GTTCTCCAAC GGGGTCGAGG TGAGTGCCCG TCCCTCTGAC
TCGATCGCCT TGGCACTTCG CACCGGCGCA CGTATCTTCG CCAGTGAGGA CGTGGTCCGG
GAGGCCGGGG TGATCATCCC TGACGACCAG GAGGACGAGG TGGAGAAGTT CAGGGAGTTC
CTTGACACAA TCACGCCCGA GGACTTCGGT CGCGCGGGGT AG
 
Protein sequence
MEVVGVRVEM PSNQPIVLLK EAHGERYLPI WIGMTEATAI AMAQAEEPPP RPLTHDLFRD 
VLDALGVRLS TVNIVALRDG IFFADLVFSN GVEVSARPSD SIALALRTGA RIFASEDVVR
EAGVIIPDDQ EDEVEKFREF LDTITPEDFG RAG