Gene Sros_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3962 
Symbol 
ID8667252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4412997 
End bp4413581 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339615 
Protein GI271965419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.545183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.218359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAC GGGATCCCGA CAGGCGGCGG GCGCTGCTGG ACGCCGCGGA CCGGGTGATC 
AGGCGGGAGG GGCCGGAGGC GTCGATGGCC TCGATCGCCG CCGAGGCGGG GATCACCAAA
CCCATCCTCT ACCGGCATTT CGGCGACAAG AGCGGGCTCT ACCAGGCCCT CGCCAACCGG
CACGTCCGCA CCGTGGTCAG CCTGCTGCGC CCGGAGTTCG ACCGGGACAG GACGGACCTG
CGCAGCCGTG CCCGGTCGAC CATCACCGCC TATCTCGACA TGATCGCCGC GAACCTCAAC
CTCTACCGTT TCCTGTTCCA CCGGGCCGGC GCCGAGGACA GCCGTACCCA CTCCCAGATG
ACCGCGATCG TGCGCAGCCT CGGTGAGGAG CTCGGCGCGG TGATCGCCGC GGAGTCCGCG
GTCCCTGACC CGGTCCGTGC CCAGGTGCTG GGGCACGCCT TCGTCGGCAT GGTCCAGGCC
ACCGGTGACT GGTGGCTGGA GCACCCCGAG GTGGACCGGG CGGAGGTCGT CGAGGGACTG
GTCAGCGTGG TCGTCGCGAC GATGTCCGCC ACGCTGCCCC GCTGA
 
Protein sequence
MSGRDPDRRR ALLDAADRVI RREGPEASMA SIAAEAGITK PILYRHFGDK SGLYQALANR 
HVRTVVSLLR PEFDRDRTDL RSRARSTITA YLDMIAANLN LYRFLFHRAG AEDSRTHSQM
TAIVRSLGEE LGAVIAAESA VPDPVRAQVL GHAFVGMVQA TGDWWLEHPE VDRAEVVEGL
VSVVVATMSA TLPR