| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3870 |
|---|
| Symbol | |
|---|
| ID | 8667160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4308024 |
|---|
| End bp | 4309358 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_003339530 |
|---|
| Protein GI | 271965334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.137849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.102807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAG ATCGCACTCA TTATCTGTAT ATAGCGGTGA TCATTGCGGT GATCTCCGGG
ATCACCGTCG GGCTCGTGGC CCCCGATCTC GGCAAGGAGC TGAAACCGCT GGGCACGGCC
TTCGTCGCGC TGATCAAGAT GATGATCAGC CCGATCATCT TCTGCACCAT CGTGCTCGGC
GTCGGATCGG TCACCCAGGC CGCCAAGGTC GGCAGGGTCG GCGGCCTGGC GCTGGGCTAC
TTCCTCGTCA TGTCGACCGT CGCGCTGGGC ATCGGCCTGG CCGTGGGCAA CCTGATCGAC
CCCGGCCACG GCCTCCAGCT CACCGACGAG CTCCGCAGGA GCGCCGAGGC CGAGGCGGCC
AAGGGCGGTG AGAGCGACAC GGTGACGTTC CTGCTCGGGA TGATCCCGAC CACGCTGGTG
TCGGCCTTCA CCGAGGGCCA GGTGCTGCAG ACCCTGCTGG TGGCCCTGCT CGCCGGATTC
GCCCTGCAGG CCATGGGGGC GCGGGGCGCG CCCGTCCTGG CCGGCATCGG GCACATCCAG
CGGCTCGTCT TCCGCATCCT CGCCATGGTC ATGTGGGCCG CCCCGGTCGG CGCCTTCGGC
GCGATGGCCG CGGTCGTCGG CGCCACCGGC GTGGACGCGC TCACGAGTCT CGGCGTCATC
ATGCTCGCCT TCTACGTGAC CTGCTTGGTG TTCGTGCTGG GCGTGCTGGG GCCGATGCTC
TGGCTGGTCG CCCGGGTCAA CCTGCTGTCC CTGCTGCGCT ACCTCAGCCG GGAGTTCCTG
CTCATCCTGG GCACCTCGTC CTCGGAGTCG GCCCTGCCGC GACTGATCGC CAAGATGGAG
CACCTCGGCG TGAGCCGCCC CGTCGTCGGC ATCACCGTGC CGACCGGCTA CTCCTTCAAC
CTCGACGGCA CCGCCATCTA CCTGACGATG GCCACCCTGT TCGTCGCGAG CGCCACCGGT
GCCCCGCTCT CGCTCGGCGA GCAGGTCTCC CTGCTGGTCT TCATGATCAT CGCTTCCAAG
GGCGCCGCCG GGGTCACCGG CGCGGGCCTG GCCACCCTCG CCGGGGGCCT GCAGTCCCAC
CGTCCCGACC TGGTCGACGG CGTCGGCCTG ATCGTCGGGA TCGACCGCTT CATGTCCGAG
GCGCGGGCGC TGACCAACTT CGCCGGCAAC GCGGTCGCCA CCGTCCTGGT CGGCACCTGG
ACCGGCGAGT TCGACCGGGA ACGCGCGGCC GAGGTGCTGG CCGGCCGCGT CCCGTTCGAC
GAGACCACCC TGCTGGAGGA GGAGCCGCCC GCTCCGCCGG CCGAACGCGC CGATCCGGAG
ATGTCGGCGG TGTAG
|
|---|
| Protein sequence | MSRDRTHYLY IAVIIAVISG ITVGLVAPDL GKELKPLGTA FVALIKMMIS PIIFCTIVLG
VGSVTQAAKV GRVGGLALGY FLVMSTVALG IGLAVGNLID PGHGLQLTDE LRRSAEAEAA
KGGESDTVTF LLGMIPTTLV SAFTEGQVLQ TLLVALLAGF ALQAMGARGA PVLAGIGHIQ
RLVFRILAMV MWAAPVGAFG AMAAVVGATG VDALTSLGVI MLAFYVTCLV FVLGVLGPML
WLVARVNLLS LLRYLSREFL LILGTSSSES ALPRLIAKME HLGVSRPVVG ITVPTGYSFN
LDGTAIYLTM ATLFVASATG APLSLGEQVS LLVFMIIASK GAAGVTGAGL ATLAGGLQSH
RPDLVDGVGL IVGIDRFMSE ARALTNFAGN AVATVLVGTW TGEFDRERAA EVLAGRVPFD
ETTLLEEEPP APPAERADPE MSAV
|
|---|
| |