Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3856 |
Symbol | |
ID | 8667146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4295844 |
End bp | 4297070 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | sarcosine oxidase subunit beta |
Protein accession | YP_003339517 |
Protein GI | 271965321 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.014492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0224272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTCC ACGACGCCGG CCCGCCCGAG CACCCCGACC GGCTGTGGAA CAGCCCCGAG CCGGCGGCCT CCTACGACGT GGTGATCGTC GGAGGGGGCG GCCACGGCCT GGCGACGGCC TACTACCTGG CCAGAGACCA CGGGATCACC AACGTGGCCG TACTGGAGAG GGGCTGGCTG GCGGGCGGCA ACATGGCCCG CAACACCGCC ATCATCCGCT CCAACTACCT CCTGGACGAG AGCGCGGGCA TCTACGAGCA CTCGCTGAAA CTGTGGGAGG GGCTGGAGGA GGATCTCGGC TACCCGATCC TGTTCAGCCG GCGCGGCGTG CTCAACCTCG CCCACAGCCT GCAGGACGTC CGGGAGGGCG TGCGCCGGGT CAACGCCAAC CGGCTCAACG GCGTCGACGC CGAGTGGCTG AGCCCCGAGG AGGTCAGGCG GGTCTGCCCG ATCGTCGACG TCTCCCAGGA CGTGCGCTAC CCGGTGCTGG GCGCGACCTA CCAGCCCCGG GCCGGGATCG CCAAGCACGA CAACGTCGCG TGGGGGTTCG CCCGCGCGGC CGCGGCGATG GGCGTCGACC TGATCGAGCA CTGCGAGGTC ACCGGGATCG ACGTCGCCGG CGGGCGGGTG CGGGCCGTAC GGACCACCCG GGGGCGCATC GCGGCGGGCA GGGTCGCGAT GTGCGCGGCC GGTCACTCCT CGGTCGTGGC CCGGATGGCG GGGCTGGACC TGCCGGTGCA GAGCCACCCC CTCCAGGCGC TGGTGTCGGA GCTGCTGGAA CCCGTGCACC CGACGGTGGT CATGTCCAAC GCCGTGCACG TCTACGTCAG CCAGGCGCAC AAGGGCGAGC TGGTCATGGG AGCGGGCATC GACGCCTGCA ACTCCTACCG GCAGCGCGGC GCCTTCCACG TCATCGAGCG GCAGATGGCC GCGGCGCTGG AGCTGTTCCC CGTCTTCGCG CGGGCACACG TGCTGCGGAC CTGGGGCGGG GTGGTGGACG TCACCCCCGA CGCCTCCCCG GTCGTGGGGC TCACCCCGGT CGAGGACCTC TACGTCAACT GCGGCTGGGG CACCGGCGGG TTCAAGGCCA CGCCGGGGGT CGGATGGTGC TACGCGCACA CGATCGCCCA CGGCGAGCCG CACCCGCTCA ACGCCCCCTT CTCCCTCGAA CGATTCACCA CCGGCGCGCT CGTGGACGAG CACGGCGCCG CCGCGGTGGC CCACTGA
|
Protein sequence | MSVHDAGPPE HPDRLWNSPE PAASYDVVIV GGGGHGLATA YYLARDHGIT NVAVLERGWL AGGNMARNTA IIRSNYLLDE SAGIYEHSLK LWEGLEEDLG YPILFSRRGV LNLAHSLQDV REGVRRVNAN RLNGVDAEWL SPEEVRRVCP IVDVSQDVRY PVLGATYQPR AGIAKHDNVA WGFARAAAAM GVDLIEHCEV TGIDVAGGRV RAVRTTRGRI AAGRVAMCAA GHSSVVARMA GLDLPVQSHP LQALVSELLE PVHPTVVMSN AVHVYVSQAH KGELVMGAGI DACNSYRQRG AFHVIERQMA AALELFPVFA RAHVLRTWGG VVDVTPDASP VVGLTPVEDL YVNCGWGTGG FKATPGVGWC YAHTIAHGEP HPLNAPFSLE RFTTGALVDE HGAAAVAH
|
| |