Gene Sros_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3812 
Symbol 
ID8667102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4254757 
End bp4255434 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID 
Productphosphoheptose isomerase 
Protein accessionYP_003339475 
Protein GI271965279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0616302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0372991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC TTGAGGGACC GCCGGCCGAG GGGGTGCGGG ACCTGTACCC CTTCCTCTAC 
GAGGGCCGGG CCGACCTCGA GTCGGTGCTG GCGGAGGCGT GCCGCTCCAC CGAGGAGAAG
GCCGCCGAGA TCGTACGGCT GCGCTGGCAG GTGGCCGAGG CGTCCGCCGA CGCGCTCATG
GAGTGCGCGG GGGAGATGGC TCTGCGGTTC GCCTCGGGCG GGCGGCTGTT CGCCTTCGGC
AACGGCGGCA GCAGCACCGA CGCCCAGGAG GTGGCGACCG CCTTCCTCCA TCCGCCCTAC
GGCCTGTCCC TGCCCGCCCT GTCCCTGACC AGCGACGTCG CCGTGGTCAC CGCGCTCTCC
AACGACGTGG GGTTCGACGT CGTCTTCGCG CGTCAGCTCG CGGCGCTGGG ACGGCACGGT
GACATCGCCG TCGGCCTGTC GACGAGCGGG GGCTCCGCCA ACGTCGTGCG CGCCTTCGAG
GAGGCGACGC GCAGGGGCAT GCTCACCGTC GGCCTGGCCG GGGACGAGGG AGGCAGGCTG
GCCGAACTCG ACCTGCTCGA CTACCTGTTC GTCATCCCGT CGTCGTCCGT GCACCGGATC
CAGGAGGCCC AGACGACGGT CTACCACGTG CTGTGGGAGC TCACCCAGCA CGCGCTCGGA
GCGGTGCCCG CCCCGTAG
 
Protein sequence
MSRLEGPPAE GVRDLYPFLY EGRADLESVL AEACRSTEEK AAEIVRLRWQ VAEASADALM 
ECAGEMALRF ASGGRLFAFG NGGSSTDAQE VATAFLHPPY GLSLPALSLT SDVAVVTALS
NDVGFDVVFA RQLAALGRHG DIAVGLSTSG GSANVVRAFE EATRRGMLTV GLAGDEGGRL
AELDLLDYLF VIPSSSVHRI QEAQTTVYHV LWELTQHALG AVPAP