| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3809 |
|---|
| Symbol | |
|---|
| ID | 8667099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4251400 |
|---|
| End bp | 4253727 |
|---|
| Gene Length | 2328 bp |
|---|
| Protein Length | 775 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_003339472 |
|---|
| Protein GI | 271965276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0483302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0563214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG GAGCGGCGCG GACCGAGCCT CGGACGCGGG TCAGGATCCG GGTCGAAGGG
ATCGTGCAGG GGGTGGGTTT CCGTCCCCAC GTCCACTCCC TGGCCCGGCG GCTGGCCCTG
TCGGGGTGGG TGGGGAACGA CAGCGAGGGC GTGTTCATCG AGGCGGAGGG GACGCGGGAG
AACGTCACGC GTTTCCAGGA GGATCTGCGG GGCCACGCGC CGCCGCTGGC GGTGATCCAC
CGCATCACCG TCACCGCCGT GCCCGCCCTC GGTGACCACG CTTTCCTCAT CGCCGGCAGC
AGGGAGGGGG GCGCGCGGGC GGCACTGATC TCGCCCGACG TCGCGACGTG CGCGGACTGC
CTGGCCGAGC TGTCCGACCC CGCCGACCGC CGTTACCGCC ATCCCTTCAT CAACTGCACC
AACTGCGGGC CGAGGTTCAC CGTCATCCGC GACGTCCCCT ACGACCGGCC GGCCACGACG
ATGGCCGGGT TCGCCATGTG CGAGGAGTGC ACGGCCGAAT ACCTCGATCC GCACGACCGC
AGGTTCCACG CCCAGCCGAC CTGCTGCCCG GCCTGCGGTC CGGCGCTGCG GCTGCTCGGC
GCCGGCGGCC GCGCCCACCA CCCCGGCGGC GCCGGGGCCG ACGGCGGCGG CGGTCGCGAT
CCGATCGGGC TCGCGGCCGA GGTGGTGCGG TCGGGCGGCG TCCTGGCCGT CAAGGGCCTC
GGCGGCTATC ACCTGGCGGC CGACGCCACC GACGAGGCCG CCGTGCGGGC CCTGCGGTCG
CGCAAGCACC GCGAGGACAG GCCGTTCGCC GTCATGGTCG CCGACCTCGA CGCCGCGCGC
ACGCTGTGCG AGCTGGACCA GGTGGCCGAA CGGCTGCTCA CCGGCCCCCG GCGGCCGATC
GTGCTGCTGC CCCGCCGCCC CGGCGCCCCG CTGGCCGAGG CCGTGGCACC GGGCGACCGC
CGCCTCGGCG TCATGCTGCC CTACACGCCC ATGCACCACC TTCTCGCCGG AGAGATCGCC
CGTCCGTACG TCCTGACCAG CGGGAACCTC TCCGACGAGC CCATCGCCTA CCGGGACCGC
GACGCGTTCA CCCGCCTCGC CGGCATCGCC GACCGCTTCC TCACCCACGA CCGCCCGATC
CACGTCCGCA CCGACGACTC GGTGGTCCTC GCGGCAGGGG GGCGCGAGCT CCCGCTGCGG
AGATCACGGG GATACGCCCC CGAGCCGCTC CGGCTCCTCC GTCCCGTACG GCGGGCGGTG
CTGGCGTGCG GCGCGGAGCT GAAGAACACC TTCTGCCTCG CCGAGGGAGG ACGCGCCTTC
GTCTCCCACC ACATCGGCGA CCTGGAGAAC TACGAGACGC TGCGCTCCTT CAGCGAGGGG
ATCGACCATT TCCGGCGGCT GTTCGACATC ACGCCCCGGG TTGTCGCGCA CGACCTCCAC
CCGGAGTACC TGTCCACCAA ATACGCCCAC GACATGGACG GAGTCGACCT GGTCGGGGTC
CAGCACCACC ACGCGCACAT CGCCTCCTGC CTGGCCGACA ACCAGGAGGC CGGCCCAGTC
ATCGGAGTGG CCTTCGACGG CCTCGGCTAC GGCGCCGACG GCACCCTGTG GGGCGGCGAG
CTCCTCGTGG CCGACCTGAC CGGCTTCACC CGGGCCGGAT GCCTGGCACC GGTGCCGCTG
CCCGGCGGCA CGGCGGCGAT CAGGCAACCC TGGCGGATGG CCGCCGCGCA TCTGGACGCG
GCCTACGACG GCACGCCACC CGGCGATCTC CAGGTGATCT CCCGCCACCG GGACTGGGAC
GACGTGGTGG CCGTGGCCAG ATCCGGCGTG AACTCCCCCC TCACCTCCAG CGCCGGGCGG
CTGTTCGACG CCGTCGCGGC GATCCTCGGA CTCCGCGACA CCGTCACCTA CGAGGGGCAG
GCCGCGATCG CGCTGGAACA GCGGGCCGAT CCCGCCGAGG AGTCCGCCTA CCCGGCCCGG
CTCCACGGCG GCGACGGCGA GCTGCTGACG ATCCGGACCG GCGACCTCAT CCGGGCCGTC
GTGGAGGACC TGCGTGCCGG CGCCGACCCG GCGGTCGTCT CCGCCCGCTT CCACAACGGG
CTCGCCGCCG CCACCGCCGC GAGCTGCGCG CGACTCCGCT CGTCCACCGG CGTCGGCACG
GTCGCCCTGT CCGGCGGCGT CTTCCAGAAC CAGCTACTTC TCGGCAGGCT CGTCCAGGCG
CTCCGGCTCC GGGACTTCCG GGTGCTGACC CACCATCGCG TCCCGCCCAA CGACGGGGGC
ATCAGCTTCG GCCAGGCCGC CGTGGCCGCC GCGCGCGATC TCCTCTGA
|
|---|
| Protein sequence | MSTGAARTEP RTRVRIRVEG IVQGVGFRPH VHSLARRLAL SGWVGNDSEG VFIEAEGTRE
NVTRFQEDLR GHAPPLAVIH RITVTAVPAL GDHAFLIAGS REGGARAALI SPDVATCADC
LAELSDPADR RYRHPFINCT NCGPRFTVIR DVPYDRPATT MAGFAMCEEC TAEYLDPHDR
RFHAQPTCCP ACGPALRLLG AGGRAHHPGG AGADGGGGRD PIGLAAEVVR SGGVLAVKGL
GGYHLAADAT DEAAVRALRS RKHREDRPFA VMVADLDAAR TLCELDQVAE RLLTGPRRPI
VLLPRRPGAP LAEAVAPGDR RLGVMLPYTP MHHLLAGEIA RPYVLTSGNL SDEPIAYRDR
DAFTRLAGIA DRFLTHDRPI HVRTDDSVVL AAGGRELPLR RSRGYAPEPL RLLRPVRRAV
LACGAELKNT FCLAEGGRAF VSHHIGDLEN YETLRSFSEG IDHFRRLFDI TPRVVAHDLH
PEYLSTKYAH DMDGVDLVGV QHHHAHIASC LADNQEAGPV IGVAFDGLGY GADGTLWGGE
LLVADLTGFT RAGCLAPVPL PGGTAAIRQP WRMAAAHLDA AYDGTPPGDL QVISRHRDWD
DVVAVARSGV NSPLTSSAGR LFDAVAAILG LRDTVTYEGQ AAIALEQRAD PAEESAYPAR
LHGGDGELLT IRTGDLIRAV VEDLRAGADP AVVSARFHNG LAAATAASCA RLRSSTGVGT
VALSGGVFQN QLLLGRLVQA LRLRDFRVLT HHRVPPNDGG ISFGQAAVAA ARDLL
|
|---|
| |