Gene Sros_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3571 
Symbol 
ID8666859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3960141 
End bp3960653 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003339248 
Protein GI271965052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.14633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCGTT ATGACGGCTT TCGCGAGTTC GTGCTCGCCC GTCAGCAGGC GCTGACACGG 
AGTGCGTACC TGCTCACGGG AGACGCACAC CTAGCCGAGG ACCTGTTGCA GAGCGTCCTG
CTCAAGGTCG CCAACCATTG GCCCAGACTG GTGCGGCACG GCACCCCCGA GGCGTACACG
CGCAAGGCCA TGATCAACCA GTACATCTCC TGGCGGCGGC GCAAACAGTT GGAGTCGCCC
AACACCGACC CGCCAGAGCG CGGGCACGCT CACGACGACG CCACGATCGA TCGCATCATC
TTGCGTCAGG CGCTTGCCAG GTTGACGCCC CGGCAGCGCG CTGTGATCGT CCTGCGCTTC
TACGAGGATC TCAGCGAGCG GGAGACCGCT GAGATCCTCG GCTGTTCGCT CGGCACGGTC
AAGAGCCAGA CCCACCACGC GCTCGGCCGC CTGCGCACGC TCGCGCCCGA GCTGTCCCAG
TTGTTCGCCG AGATCGAGGA GGTGCGCCGA TGA
 
Protein sequence
MNRYDGFREF VLARQQALTR SAYLLTGDAH LAEDLLQSVL LKVANHWPRL VRHGTPEAYT 
RKAMINQYIS WRRRKQLESP NTDPPERGHA HDDATIDRII LRQALARLTP RQRAVIVLRF
YEDLSERETA EILGCSLGTV KSQTHHALGR LRTLAPELSQ LFAEIEEVRR