| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3415 |
|---|
| Symbol | |
|---|
| ID | 8666703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3755186 |
|---|
| End bp | 3756247 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | metalloprotease-like protein |
|---|
| Protein accession | YP_003339095 |
|---|
| Protein GI | 271964899 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.154601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.658534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTACG GCCAGCCTCC GCCGCCGGAC CCTCGGCACC GGCAGCCGCC GTATCCGCCG
CCCCAGTGGC AGCCGCAGCG CCCCCGCTCC GGCGGCGGCG CCGGCGTGAT CATCGGCGGG
GTCTTCGGCG TGGTCGCGCT GGTGTTCGTC GGGCTGGTGG TGGTCGGGGC GCTGATCAAG
GGCAGCCGCA CCGCGGACCC GGTCTCGCCG GTCGCGATCC CCACCTTCAC CCCGTTCGAG
CCGCCCGCGA GCAGCACCGC CTCCCCGGAG GCCACCCAGT CACGTCCAAC CGAGTCCACG
GTCACCACCC CGGCCAGGCG GCGGATCCTG AACACCACCC TGAAGAACAA CACGCTCTAC
CGGGCCGGGG GCCTGCCCAG GGTGAACTGC CCGGTGGGCT CGCCCAGCAT CTACAGCCAC
AGCCAGCTCA AGGCGCTGAT CCTGAAGACC TCCAAGTGCC TGGACAGGGG CTGGTCCCAG
ATCATGCGCG CGCAGGGCAT GACCTGGCAT CCCCCGGGCT ACGCCGTCAC CTCCAGCCGG
GGACGCGGCG CCTGCGGGGA CTTCCCCTCG CCCGGCAGCA TCGTGCCGTA CTACTGCCCG
CGCAACACCA CCATCTACGC CTCGACCACG GCGATGGCGA AGGGGTCCGG AAACTCCGGC
GGGTATGGCC AGATCACCGA CTGGCACGGC GGGGTCATCA GCATGATGGC CCACGAGTAC
GGGCATCACG TCCAGCAGCT GTCGGGCCTG TCCAACGACT GGTGGCAGCA GACCACGCGC
TCCACCAGCC GGAGCGGCAA GCTCGCGCTG AGCCGCCGGT TCGAGCTCCA GGCCACCTGC
TTCGGCGCGA TGTTCATGCG CTCGGTCTCG GCCAGCTACC CGGTCACCCC GGCGCGGCGC
AACACGCTCT ACTACTTCTA CTCTCGGGTC GGCGACTGGC CGGGCTACCC CCGCGACCAC
GGCTCGCCCG CGAACAACAA TCGCTGGTTC CGCCAGGGCT ATGAGAAGAA CAAGACCTTC
CAGTGCAACA CCTGGCTGGC CCCGGCCTCA TCGACGTCGT AG
|
|---|
| Protein sequence | MPYGQPPPPD PRHRQPPYPP PQWQPQRPRS GGGAGVIIGG VFGVVALVFV GLVVVGALIK
GSRTADPVSP VAIPTFTPFE PPASSTASPE ATQSRPTEST VTTPARRRIL NTTLKNNTLY
RAGGLPRVNC PVGSPSIYSH SQLKALILKT SKCLDRGWSQ IMRAQGMTWH PPGYAVTSSR
GRGACGDFPS PGSIVPYYCP RNTTIYASTT AMAKGSGNSG GYGQITDWHG GVISMMAHEY
GHHVQQLSGL SNDWWQQTTR STSRSGKLAL SRRFELQATC FGAMFMRSVS ASYPVTPARR
NTLYYFYSRV GDWPGYPRDH GSPANNNRWF RQGYEKNKTF QCNTWLAPAS STS
|
|---|
| |