| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3408 |
|---|
| Symbol | |
|---|
| ID | 8666696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3746859 |
|---|
| End bp | 3747590 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-2 type transporter, permease protein |
|---|
| Protein accession | YP_003339088 |
|---|
| Protein GI | 271964892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.184246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.618546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC TCCGCGACAC CTGGCTGATC TTCCGGCACC ACGTCCGGAT CTCCCTGCGG
CAGAAGGCCG GGATCGTCTT CGGCGTCCTG CAGCCCCTGC TCTACCTGGT GCTGTTCGGG
CCGCTGTTCG CCACGATCGG GACCTGGGAG ACGCTGATCC CCGGCCTGCT GGTCCAGGTG
GGGCTGCTCA GCGCCGGCAT GGCCGGCTTC GGCGTCGTCT TCGACGCCAG GTCGGGCGTG
CTGGAGCGGC TGCGGGTCAC CCCGGCCCAC CGGGTGGCCC TGCTGCTCGG CCGGGTCCTG
GGCAGCTCGG TCACCCTGCT GATCCAGTCG GTCGCGCTGA TCCTGGTGGG CTACGCCTTC
GGCATGCGCG CGGCCGTCCC CGGGGTGCTG GCCGGGCTGG TCCTCATGGC GCTGCTGGGG
GTGAGCCTGG CCGCCCTGTC CAACGCGATC GCGCTCACCA TGAACCCCGA CCTCTTCGCG
CCAGTGATGA GCACGGGAAT CGTCCCGCTG GTGCTGCTGT CCGGCGCGTT CCTGCCGATG
TCGATGGCGC CCGGCTGGCT GGACGCGCTG TCCCGGCTCA CCCCCTTCCG CTACGTGCTC
GAAGCCCTGC GCGAGCTGTT CGGCGGGCAC TACTCGACCT GGACCGTGGC CGTGGGCGTC
GCGGTGACCC TGGTCCTGTC GGTGACCTGC GTGGCGGTCG GGACCCGCGT CTTCAACCGC
GAGAACGCCT AG
|
|---|
| Protein sequence | MSILRDTWLI FRHHVRISLR QKAGIVFGVL QPLLYLVLFG PLFATIGTWE TLIPGLLVQV
GLLSAGMAGF GVVFDARSGV LERLRVTPAH RVALLLGRVL GSSVTLLIQS VALILVGYAF
GMRAAVPGVL AGLVLMALLG VSLAALSNAI ALTMNPDLFA PVMSTGIVPL VLLSGAFLPM
SMAPGWLDAL SRLTPFRYVL EALRELFGGH YSTWTVAVGV AVTLVLSVTC VAVGTRVFNR
ENA
|
|---|
| |