Gene Sros_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3400 
Symbol 
ID8666688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3740561 
End bp3741121 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339080 
Protein GI271964884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.26535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.40854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCGA CCGTGCCCTT CCGTCTGGCC CGCACCTCGG CCTTCGCCGT GGTGTCCCTC 
GGGCTGGGCA TGATCGCGCA CGTGCTCGGC GGGGGCGCGA TGCCCGTGTG GAGCGCGGCG
GTCGGGCTCG CGCTGGCGTT CGCGGCGGCA CTCCCGCTGA CCGGGCGCGA GCGCGGCGCG
GGGGTGATCC TGCCCCTTCT CGGGAGCACG CAGGCGGCAC TCCACCTGCT GTTCTCCGCG
ACGGCCCCGG CTGTCTCCCA CGAGGCCCTC GCCCACCCGC ACTCGGGCCT GCTGCCCGGC
CTCGCCATGC TGGTCATGCA CGGCTGGGCG GTGGGGCTGA CCTCACTGTG GCTCGCCCGC
GGCGAAGCCC TGCTCTGGGC GCTGCTGCGA CGGCTCGGCG CCCGACTCGG CCCGGTCCTC
ACCGGCGCCC CCTCCCCCGT GCCGGCGCCG CCCTCGGCGA TGGCGCACCC GGACAGACCC
GCCGCGCTCC GTCCCTCCCT GCTCCGTCAC GTGGTGAGCC GGCGCGGTCC GCCGGCGCCC
CTCCCCGTCA CGTCCTTCTG A
 
Protein sequence
MPATVPFRLA RTSAFAVVSL GLGMIAHVLG GGAMPVWSAA VGLALAFAAA LPLTGRERGA 
GVILPLLGST QAALHLLFSA TAPAVSHEAL AHPHSGLLPG LAMLVMHGWA VGLTSLWLAR
GEALLWALLR RLGARLGPVL TGAPSPVPAP PSAMAHPDRP AALRPSLLRH VVSRRGPPAP
LPVTSF