Gene Sros_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3213 
Symbol 
ID8666501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3501734 
End bp3502888 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338899 
Protein GI271964703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0446815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA GCGAACTGAC GCTCACCCCG CCCGCCCCCG TGGCCGCCGT GTCCACCACG 
GCGGCGGCGA CCATGCTCCC GCTGCCGGAC GGTCGCGAGG CCGAGCTCGG CGCGAAGGCG
CGGCGGTTCG CCGCCGAGCT GGCCGCGCTG GACCACCGGC AGCCGGACTT CACCCGCAAG
GTGCGCGACA TCTCCTCGAT GGGCGACGCC GAGATCCGCT CCGCCTCCCA GGCGGCCAAC
CGGATGTTGA AGCGCCCGGT GGCCGCTTTG GCGGCGGCCC GGGGAGAGGG GGCCGACGCC
CGGGGGCGGG TGGCGGACCG GCTCGTGGCG CTGCGCCGTA CCGTGGTGGA CCTCGACCCG
AAGCAGGCCG CGGGCGGGCC GCGCAAGCTG CTGGGACTGA TCCCGTTCGG GGACCGGCTG
CGCGACTACT TCGCGAAGTA CCACTCCGCC CAGAAGCACC TGGACGACAT CATCCGGGCG
CTCCGATCCG GCCAGGACGA GCTGCTCAAG GACAACGCCG CGATCGAGGG CGAGAAGGCG
GACCTGTGGG AGGCGATGAC GCGCCTGCAG GAGTACGCGG TGACGGCCGC CGCGCTCGAC
GCCGCGCTGG AGGACCGCGT CCTGGCCCTC GACGCGGCCG AACCCGGGAA GGCGGCGGCG
CTCCGCTCCG ACGCCCTGTT CACCGTACGG CAGAAGCACC AGGACATCCT CACCCAGCTC
GCCGTCTCCG CCCAGGGCTA CCTGGCCCTC GACCTGGTCA GGAAGAACAA CCTGGAGCTC
AGCAAGGGCG TGGACCGGGC CACCACCACG ACCGTCGCCG CGCTGCGCAC CGCCGTGACC
GTCGCCCAGG CCCTGGCCAA CCAGAAGCTG GTGCTGGAGC AGATCACCGC GCTCAACTCC
ACCACCGGCG ACCTGATCCT GGCCACCGGC GAGATGCTGC GCACCCAGGC CGGCGCCATC
CAGACCCAGG CCGCCTCCAC CACGGTCGAC ATGGACGTCC TGCGCCGGGC CTTCGACAAC
GTCTACGCCA CCATGGACAT GATCGACGGC TTCCGGTCGC AGGCCGTGGA GAGCATGGCC
GTCACCGTGG AGAGCCTGAG CACCGAGCTC GCGCACGCCA GGACCTACCT CGACCGCGCC
GAGGCCGCCT CGTGA
 
Protein sequence
MADSELTLTP PAPVAAVSTT AAATMLPLPD GREAELGAKA RRFAAELAAL DHRQPDFTRK 
VRDISSMGDA EIRSASQAAN RMLKRPVAAL AAARGEGADA RGRVADRLVA LRRTVVDLDP
KQAAGGPRKL LGLIPFGDRL RDYFAKYHSA QKHLDDIIRA LRSGQDELLK DNAAIEGEKA
DLWEAMTRLQ EYAVTAAALD AALEDRVLAL DAAEPGKAAA LRSDALFTVR QKHQDILTQL
AVSAQGYLAL DLVRKNNLEL SKGVDRATTT TVAALRTAVT VAQALANQKL VLEQITALNS
TTGDLILATG EMLRTQAGAI QTQAASTTVD MDVLRRAFDN VYATMDMIDG FRSQAVESMA
VTVESLSTEL AHARTYLDRA EAAS