| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3078 |
|---|
| Symbol | |
|---|
| ID | 8666365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3359858 |
|---|
| End bp | 3360619 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003338771 |
|---|
| Protein GI | 271964575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.635173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.32237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCC GAGGGCCCGT GCTGATAGAC ACCGACGCGA TGCTGGGCCG CCATCCCGCC
CGCGACGTCG GCGCGGGCAC CGTCGCGGAG GCGCTGGCCG GGATGGACCG CTTCGGCATC
TCCGAGGCGC TGGTCGGGCA CACGCTGTCG TGGCTGCACG ACCCCCGCAC CGGCAACCGG
GCGCTGCTGG AGCTGGTCGC CGGCCAGCCC CGGCTGCACC CGTGCTGGGT GATGCTCCCC
GACACCTGCG GCGAGACGGG AACCCCGGCG GCGTTCGTGA CCGCCGCCCT GGAGAGCGGC
GTCCACGCGG TGCGCGCCTA CCCCGCCGAC CACGGCTACG ACCTCGCGGG CGTGGACGCG
GCGCCGATGC TCGACGCGGT CGCCGAAGCC GGGCTCCCCC TGCTCCTCGA CGCCGCCCAG
ACCACGTGGC CGCAGGTGGA GGCGGTCGCC GCGGCCCGCC CGCACCTCGC GATCGTGGTC
GGCGGGCTCG GCTACCGCGT CCTGCGCCAG GCGGCCGGCG TCCTGGCCCG CACGGAGAAC
GTCCACCTGG GGCTGGCCAA CCTCTCCTCG CACTGCGGCC TGGAGTGGCT CGTCGAGCGG
TTCGGCGAGC AGCGGCTGGT CTTCGGCACC GGCGCGCCCA CCCGTGATCC GGCCGAGGCG
GTCACCCGGC TGCTCTGGTC GGAGCTCGAC GACGGAGCGG TGGCGGCGAT CGGCGCGGGC
AACCTGCGGA GCCTGCTCCG CAAGAAGGCG AGAGCAGCTT GA
|
|---|
| Protein sequence | MSSRGPVLID TDAMLGRHPA RDVGAGTVAE ALAGMDRFGI SEALVGHTLS WLHDPRTGNR
ALLELVAGQP RLHPCWVMLP DTCGETGTPA AFVTAALESG VHAVRAYPAD HGYDLAGVDA
APMLDAVAEA GLPLLLDAAQ TTWPQVEAVA AARPHLAIVV GGLGYRVLRQ AAGVLARTEN
VHLGLANLSS HCGLEWLVER FGEQRLVFGT GAPTRDPAEA VTRLLWSELD DGAVAAIGAG
NLRSLLRKKA RAA
|
|---|
| |