Gene Sros_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3074 
Symbol 
ID8666361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3354226 
End bp3355149 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID 
Productsugar ABC transporter permease protein 
Protein accessionYP_003338767 
Protein GI271964571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.146884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTG GCCGCGGAAA ACGCGACGTG CGAGCGCCCC GGCCCGGCAG GTTGCCGGGG 
CAGCGCTGGT ACACGCCCTA CCTCTTCCCG CTGCCGGCCC TGATCCTGTT CGGGGTCTTC
TTCGCGTGGC CGGCGATCAC CGCGATCCAG CTGTCGTTCT TCGAGTGGGA CGCGATCTCC
GAGCCGGTCT TCGTGGGCGC GGGCAACTTC GTCCGGCTCA TGGGCGACGA CAGGTTCTGG
ACCGGCCTGG GCAATTCGCT GCTGTTCCTG GTGGGGATGT TCCCGCTGCT CGTCGTCGTC
CCGCTGCTGC TGGCCGTACT CGTCAACCAG AGACTGCCGG GCATCAAGAC GTTCCGGATG
CTCTACTACC TGCCCGTCGT GACCTCGATG GTCGCGGTCG GCGTCGCCTG GGAGTACGTC
TTCAACCAGC AGGGCGTGCT CAACTGGATC CTCACCGGCT TCGGCGTCCT CGACCAGCCG
ATCCAGTATC TCCTCGACCC CGTGTGGGCC CTTCCGGCCC TCGTCCTCGT CGAGGGCTGG
AAGAGCATGG GCGTCTTCAT GATGATCTAT CTCGCCGGGC TGCAGACCAT CCCCACGAAC
CTCTACGAGG CCGCCAAGGT CGACGGCGCC TCGGCCTGGC ACCGGCTGCG CCACATCACC
GTCCCGCTGA TCGTCCCCTA CATCGCGGTC ACGCTGACCA TGGAGATGCT TGAGGCGATG
CAGGTCTTCA CGTCCGTCTA CGTGATGACC CAGGGCGGCC CGCAGGACTC CACCCTCACG
CTCGGCTACT ACATCTGGTC GGCGGCCTTC CAGAAGTACG ACATGGGTTA CGCCAGCGCC
ATGGGCCTCG TCCTGTGGGT CCTCCTGATC CTCATGGCGC TGGCCAACTA CCGGATCACC
AAGGGAAGGA CGGTCACGCC ATGA
 
Protein sequence
MRRGRGKRDV RAPRPGRLPG QRWYTPYLFP LPALILFGVF FAWPAITAIQ LSFFEWDAIS 
EPVFVGAGNF VRLMGDDRFW TGLGNSLLFL VGMFPLLVVV PLLLAVLVNQ RLPGIKTFRM
LYYLPVVTSM VAVGVAWEYV FNQQGVLNWI LTGFGVLDQP IQYLLDPVWA LPALVLVEGW
KSMGVFMMIY LAGLQTIPTN LYEAAKVDGA SAWHRLRHIT VPLIVPYIAV TLTMEMLEAM
QVFTSVYVMT QGGPQDSTLT LGYYIWSAAF QKYDMGYASA MGLVLWVLLI LMALANYRIT
KGRTVTP