Gene Sros_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2981 
Symbol 
ID8666268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3248969 
End bp3250216 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content71% 
IMG OID 
ProductMembrane protease subunits stomatin/prohibitin 
Protein accessionYP_003338678 
Protein GI271964482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.464072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG AGTTCTCCAA GATCAAGGAA TCCCTGGCCT CCTGGTCGGA GATCCGCCAG 
CTGCTGCGCG GCGGCGAGTC CGGCCAGCTC GTCCCGGTGG TCATCCCCAA GGACCGCCGG
GGCTTCGCCT GGCTGACTCT GATCTTCCTG GCCCTCTACC TCGCCGGTAC GGCCCTGCTG
TCCGGCGGGG TGTTCGCCGC GCTGGCCGCG CTCGGCGCGG TGCTGTCCCT GATCGTGGCA
CTGGTCTGGC TGTGGCGCCG GGCGATCATC GAGATCGAGG AGGGCACCAC CGGCGTGCGC
AGCCGGTGGG GCGCGATCGT GGGCACCCTG CCCCCGGGCC GCCACTACCT GTGGCTGCCG
TGGGACCGGG TGGACGCGGT GGTGGACACC TCCACCGAGA TCCCCTACTC CGCTCCGATC
GTGGCCTGCC CGACCGCGGA GAACGTGCCG CTGAAGTCGA TCGAGTTCTT CCTGAAGTTC
CGCATCATCG ACCCGGTGGC CTTCGTCCGG ACGATCGGCG CCGGCAACTT CGACCTCGTG
CTCAGCAGCG CCGTACAGGA CGCCATCCGC CAGCGCAGCC GCCTCGTGCA CACCGAGCGG
GCCTACGACC TGCGCGGGTC CGACGTCGGC GACATGCAGG AGCTCCTGAC CCGCCAGCTC
GGCCGCTACG GCGTGCGGAT CACCGGCGCC AACATCCCCG ACGTGCAGCT GCCCGACCAG
TACCAGCAGC ACCTGGCCAC CCGCGAGAAG GTCGCCAAGG AGCTGTCGGC CTTCGAGCGG
GAGTGGGAGC TCACCCGCAA GCGGCGCATC GACACCCTGC TGATGGAGAT CGAGCGCTCC
AAGAAGACGC GGGACGCCCG CATCGTCGAG GTCCGGGCCG CCGCCAACAC CGCGCGCAAG
GACGTCGCCC GCATGCTGGA GGAGCACGAG ACCGAGGCCC AGCGGGTGCG CTGGGAGATC
GAGGCCAAGG GCCGGGCCCA GCTCACCTCC GCGGAGAACG AGGCCAAGGG GCTGCGCCGG
CTGGCCGACG CCTACCGCGA CAACCGGGCG GTGCTCCAGT ACGAGCTGGC CCGCCGCCGC
CTGGACGTGG GCGCCAAGCT GGCCGAGAAC GCCCCGCGCC CGGTCGTCGT GCGCACCGAC
GGCGCGTCCG GCGAGTCCTC CGTGCTGTCC ACCATGCTCC TGGCCCAGAT CCTGCCGCAG
CTCGGCAGCG GGAACGGCCA GGTCAAGCGA GCCGTTGAAC CCAACTGA
 
Protein sequence
MSREFSKIKE SLASWSEIRQ LLRGGESGQL VPVVIPKDRR GFAWLTLIFL ALYLAGTALL 
SGGVFAALAA LGAVLSLIVA LVWLWRRAII EIEEGTTGVR SRWGAIVGTL PPGRHYLWLP
WDRVDAVVDT STEIPYSAPI VACPTAENVP LKSIEFFLKF RIIDPVAFVR TIGAGNFDLV
LSSAVQDAIR QRSRLVHTER AYDLRGSDVG DMQELLTRQL GRYGVRITGA NIPDVQLPDQ
YQQHLATREK VAKELSAFER EWELTRKRRI DTLLMEIERS KKTRDARIVE VRAAANTARK
DVARMLEEHE TEAQRVRWEI EAKGRAQLTS AENEAKGLRR LADAYRDNRA VLQYELARRR
LDVGAKLAEN APRPVVVRTD GASGESSVLS TMLLAQILPQ LGSGNGQVKR AVEPN