Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2929 |
Symbol | |
ID | 8666215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3187651 |
End bp | 3189423 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003338627 |
Protein GI | 271964431 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.160042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.358264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTCGC TTCAGGGGGT CGAACGGTCG GCGCTGGCCA CCGTCAGGCA CGGGCTGTCG CTCACGCCGG AGTTCCGCAA GGGGCTGGCA GGCACGCTCG TGCTGGCCGT GCTGGCCACG CTCGGCAAGG TGATCGTGCC GATCGCCGTC CAGCAGACCA TCGACCGGGG GCTCAAGGGC GAGGTCCCCG ACCTGCCCTA CATCCGCGCC GCCGTGCTGC TGTGCGCCGC GGCCGTGGTG CTGACGGCGG TGTGCGCGTA TCTGATGAAC GTCCGCCTGT ACAAGGCCAC CGAGGCCTCC CTGGCCGGGC TGCGGGTGCG AGGCTTCCGG CACGTGCACG ACCTGTCGGT GCTCACCCAG AACTCCGAGC GGCGTGGCGC CCTGGTCTCC CGGGTCACCG GCGACGTGGA CCAGATCAGC GTGTTCATGC AGTGGGGCGG GCTGATGATC ATCATCGCCC TGGGGCAGCT CCTGGTCGCC ACCGTGCTGA TGTTCGTCTA CTCCTGGCAG CTCGCCCTGC TGGTCTGGAT CTGCTTCCTG CCGCTCATGG TCGTGCTGCC GCGCTTCCAG CGCTGGCTGT CGGGCGCCTA CACGCTGGTC CGCGAGCGCA CGGGCGACAT GCTCGCCGCC GTCAGCGAGT CGGTCGTGGG CGCGGCGGTG ATCCGGGCCC ACGGGGCGGA GTCCCGTACG GCGGGCCGGC TGGACAGCGC GATCGACGCC AACAGGGCCG CGCAGGCCCG CACGCAGCGG ATCGTCGCCA CCGTCTTCCC GCTGACCGAG ATCGTCGCGG CGGTGGCGCT CGCCGGAGTG GTGCTGCTCG GCGTGCGGCT GGGCATCGGC GGTGAGATCA CCGCCGGGCG CCTGATCGCC TTCCTGTTCC TGATCACGCT GTTCGTCTCG CCCCTGCAGA TCGCCACCGA GGTGCTGAAC GAGGCGCAGA ACGCGGTCGC CGGCTGGCGG CGCATCCTCG GCGTGCTCGA CACCCCGCCC GACGTCGCCG ACCCGGGCCC GGAGGGCGTC GAGCTGCCGC GCGGCCCCAT CTCGGTCTCC TTCGAGGAGG TCGGGTTCTC CTACCCCGGC GGGGTGCCGG TGCTCAGCGA GGTGTCGGTG GACATCCCGC CGCGCTCGCG GATCGCGGTG GTGGGGGAGA CCGGCTCGGG CAAGACGACC TTCGCCAAGC TGCTCACCCG GCTGATGGAC CCCGTCTCCG GCCGGGTCAC CGTCGACGGC GAGGACCTGC GCGCGGTCCG GTTCTCCTCC CTGCGCGAGC GGATCGTCAT GGTGCCCCAG GACGGCTTCC TGTTCGACGG CACCCTGGAG GAGAACATCC GCTTCGGCCG CCCGTCGGCG ACCGAGGCGG AGATCCGGCT GGCCATGACC GAGCTGGGCC TCACCGGCTG GCTGGAGGGC CTGCCCGCGG GCCTGGCCAC CCATGTCGGC CAGCGCGGGG AGTCGCTGTC GGCGGGGGAG CGCCAGCTCG TGGCACTGGC CCGCGCCTAC CTGGCCGACC CCGACCTGCT CCTGCTCGAC GAGGCCACCT CGGCGGTGGA CCCGGCGACG GAGGTACGGC TGGCCCGCGC CCTGGAGGGG GTCACGCGGG GCCGTACCGC CATCTCCATC GCCCACCGGC TGTCCACCGC CGAGGCCGCC GACGAGGTGC TCGTCTTCGA CAGGGGCCGG ATCGTGCAGC GCGGCCCGCA CGCCGAACTC GTCGAGGAGC CCGGCGTCTA CGCCGACCTG CACGCCTCCT GGGTCTCGGC CGCCCGCTCG TAG
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Protein sequence | MSSLQGVERS ALATVRHGLS LTPEFRKGLA GTLVLAVLAT LGKVIVPIAV QQTIDRGLKG EVPDLPYIRA AVLLCAAAVV LTAVCAYLMN VRLYKATEAS LAGLRVRGFR HVHDLSVLTQ NSERRGALVS RVTGDVDQIS VFMQWGGLMI IIALGQLLVA TVLMFVYSWQ LALLVWICFL PLMVVLPRFQ RWLSGAYTLV RERTGDMLAA VSESVVGAAV IRAHGAESRT AGRLDSAIDA NRAAQARTQR IVATVFPLTE IVAAVALAGV VLLGVRLGIG GEITAGRLIA FLFLITLFVS PLQIATEVLN EAQNAVAGWR RILGVLDTPP DVADPGPEGV ELPRGPISVS FEEVGFSYPG GVPVLSEVSV DIPPRSRIAV VGETGSGKTT FAKLLTRLMD PVSGRVTVDG EDLRAVRFSS LRERIVMVPQ DGFLFDGTLE ENIRFGRPSA TEAEIRLAMT ELGLTGWLEG LPAGLATHVG QRGESLSAGE RQLVALARAY LADPDLLLLD EATSAVDPAT EVRLARALEG VTRGRTAISI AHRLSTAEAA DEVLVFDRGR IVQRGPHAEL VEEPGVYADL HASWVSAARS
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