Gene Sros_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2550 
Symbol 
ID8665836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2779156 
End bp2780625 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content74% 
IMG OID 
ProductBeta-lactamase class C and other penicillin binding protein-like protein 
Protein accessionYP_003338267 
Protein GI271964071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC GGAACGGCCT GGCGTTCTCC CCGGGTCAGC TGCTGGCCGC CGCGGTGGCG 
GCGGGGCTGG CCGCGCTCAT CGCCTTCGCC GTCGTGCCCA CGCCGCCGCG GCTCGGGGCC
GCGACGACGG GTGACCGCGC GCTGGCCCAG GCCGTGCGCG AAGCGGCGGG ATCCGACGGC
TACCGCGCCC TGTCCGTGGC ACTGGTCGAG AACGGCGTCA TCCGCACGGC CGGGGTCGGC
GACACGGGCG GGCCCGTCCC GCGTCCGGTC GACGCGTCCA CCCCGTTCGA GATCGGCTCG
GTTCCCAAGG CGTTCACCGG CATGATCCTC GCCGACATGG CGGCCCGGGA CGGCCTCGAC
CCGCGTTCGC CGGTGCCCGG CCTCAAGGAC TCGATCACCT ACGAGGAACT GACCAGCCAC
CGTTCCGGCC TCCCCCGGCA GCCCGGCGGC CTGGGCATGC TGCTGAAGGC GATCACCGCG
AACTACAGCC ACGGCAACCC CTACGGCGGA CAAGACGTCT CCGACGTGCG CGAGGCGGCC
GCCTCGGCCG GGCTCTCCGG GCGCGGCAAG GTCTCCTACT CCAACCTCGG CGTGGCGGTG
CTCGGAAACG CGCTCGCCGA GCGGGCGGGC CTCCCCTATC CCGAGCTGCT GAAGCGGCGG
GTGCTGGAGC CCCTCGGCAT GAAAGCCACC ACCACGTCGG CCCTGCCGTC GGGCAGGGCG
CACGGTTACA CGGAGGCCGG ACACGAGGCG GACCCATGGA CGGGCACGGG CTACGTCCCG
GCGGGCATCG GTGTCTGGTC CACCAGCGCC GACCTCGCCC GCCTCGCCGA CGCGATGCTC
AAGGGCAGCG CCCCGGGCGC CGACGCCGCG ACGCCGCGCT TCACCGAGGA CCAGACCCGT
CGCATCGGCT ACGGCTGGTT CACGACGAAG ACCAGCAAGG GCCAGGTCAC CTGGCACAAC
GGCGGCACCG GCGGCTTCAG CTCGTACGTC GGCTTCGACC GCGACAGCAA GCGCGGCGTG
GTCGTGCTGG GCAACACCGA CAAGGGCGTC AACCACGTGG GCCTGCGGCT GCTCGGCCAC
GACGCGCCGG AGCCCTCCCC CAGTACCCAG GCCCTCATCA CGATCGCGAT CACCCTGCTC
CTGCCCCTCG GCGCCGCCCT GACCGCGTGG GAGTCGGCGA CCCGCCGCAC GCCGACCCGC
AACCGCCCCC CGCTCGACCG CCTCGGCGTG GTCAACACCA CGACCACCGC CGTCCTGATC
CTCTGGATGG CCTGGCTGGT CGGAGCCTGG GGCACGCTGC CCTCCGCCCT GTTCATCCTC
GCCACGGCGG CCACGGCCGC CGGCACGGCC CTGACCCTCA CCCGCTGGCG CGACCTCCCC
GCGGCCCGTC AGCCCGGCCG CTGGCTCCCC TCCCTCTTCG GCCTCCTCGT CAACGTCGCG
ATCGCCACAG CCCTCCTCCT CGCGACCTGA
 
Protein sequence
MFKRNGLAFS PGQLLAAAVA AGLAALIAFA VVPTPPRLGA ATTGDRALAQ AVREAAGSDG 
YRALSVALVE NGVIRTAGVG DTGGPVPRPV DASTPFEIGS VPKAFTGMIL ADMAARDGLD
PRSPVPGLKD SITYEELTSH RSGLPRQPGG LGMLLKAITA NYSHGNPYGG QDVSDVREAA
ASAGLSGRGK VSYSNLGVAV LGNALAERAG LPYPELLKRR VLEPLGMKAT TTSALPSGRA
HGYTEAGHEA DPWTGTGYVP AGIGVWSTSA DLARLADAML KGSAPGADAA TPRFTEDQTR
RIGYGWFTTK TSKGQVTWHN GGTGGFSSYV GFDRDSKRGV VVLGNTDKGV NHVGLRLLGH
DAPEPSPSTQ ALITIAITLL LPLGAALTAW ESATRRTPTR NRPPLDRLGV VNTTTTAVLI
LWMAWLVGAW GTLPSALFIL ATAATAAGTA LTLTRWRDLP AARQPGRWLP SLFGLLVNVA
IATALLLAT