Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2471 |
Symbol | |
ID | 8665757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2695135 |
End bp | 2696727 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | putative ABC transporter periplasmic binding protein |
Protein accession | YP_003338190 |
Protein GI | 271963994 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.10018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCCACC TCTCCGCCGC ACCCATGAAC CGTCGCGGTT TCCTGCAGTT CGTCGGGGCC GTGAGCGCCG CCACCGCCTT CACCGGCTCG CTGGCCGCCT GCTCCGGTCC GGAGTCCACC ACGGGCCCCG CGCCGGCGGC CGCGGCGGAC ACGATCGAGG CGGGCATCTC CTACGCCCTG TCGACCGGCT TCGATCCGAT GACCTCCTCC GGCGCGACGC CGGTCGCCGC CAACATGCAC GTCTTCGAGG CGCTGTTCGA CCTCGACCCG GTGACCCGCG AGTCCTACGC CGCGCTGGCC GCGCGCGACC TGGAGAAGGT GGACGACACG ACCTACAAGG TCGCGCTCCG CGACGGCGCG ACCTTCCATG ACGGCTCCGC CGTGACGGCC GGCGACGTGG CCTTCAGCTT CCAGCGCGTG ATGGACCCGG CCAACGCCTC GCTCATGGTG CAGTTCATCC CGTTCGTCGA GAGCGTCACC GCCGCCGACG CCAAGACCGT CGAGATCAAG CTCAAGTACG CCTTCCCGCT GCTCAAGGAG CGGCTCGCGG TCGTCAAGAT CGTGCCCAAG GCCCTCGTCG AGAAGGACAA GACCGCCTTC GACGCCAAGC CCGTCGGTTC CGGCCCCTAC AGGCTGGTCG AGGCGACCAA GGAAGACAAG ATCGTCTTCG AGCGGTGGGA CAAGTACAAC GGCACCCGCC CGGCCAAGGT CAAGAACATG GTCTGGCGGC TGCTGTCCGA CTCCTCGGCC CGCGTCACCG CGCTGGAGTC GGGCCGGGTG GCGGCGATCG AGGACGTCCC CTACATCGAC GTGCAGAAGG TCGGCCAGAA GCACAAGCTT GAGGCCGCGC AGTCCTTCGG CCTGCTCTTC CTCATGTTCA ACTGCGCCGA GAAGCCCTTC GACGACAAGC GCGTGCGCCA GGCGCTGCAC TACGCCATCG ACACCGACAA GGTGATCCAG ACGGCGATGC TCGGCAACGC CGCCGCGGCC ACGGGTTACG TGCAGGAGAC CCATCCGGCC TACGCCAAGG CCTCGACCGT CTACGGCTAC GACCCGGACA AGGCCAAGGC GCTGCTGAAG GAGGCCGGCG TCTCCGGCCT GAACGTCACC ATGGTGACCA CCGACACCGG CTGGGTGAAG GACGCCGTCC CGGTCATCAA GGAGGGCTGG GACGCCGTCG GCGTGACCAC CACCCTCGAC ATCGGCCAGT CCGGCGGCCA GTACACCAAC AAGGTCGACC CCGGCAAGTT CCAGATCCTG GTGGCGCCCG GCGACCCGTC GGTCTTCGGA AACGACATGG ACCTGCTGCT CCGCTGGTTC TTCGACGGCC TCTGGCCGCA GAAGCGGTTC CGCTGGGACG GCACCAAGGA GGCGGGGAAG GTCCTGGGGC TGCTCGACGA GGCGGCGAAG ACCGGCGACG CGGCGGAGCA GAAGAAGCTG TGGGCGGAGG CGGTCGACGT CATCGCCGAG GAGGCGCCGC TCTACCCGAT CCTGCACCGC AAGCTGCCCA CCGCCTGGAA CGACAAGAAG CTGACCGGCT TCAGGCCCAT CCCCACGACG GGCCTGTCGT TCCTCGACGT CGGCCTCGCC TGA
|
Protein sequence | MPHLSAAPMN RRGFLQFVGA VSAATAFTGS LAACSGPEST TGPAPAAAAD TIEAGISYAL STGFDPMTSS GATPVAANMH VFEALFDLDP VTRESYAALA ARDLEKVDDT TYKVALRDGA TFHDGSAVTA GDVAFSFQRV MDPANASLMV QFIPFVESVT AADAKTVEIK LKYAFPLLKE RLAVVKIVPK ALVEKDKTAF DAKPVGSGPY RLVEATKEDK IVFERWDKYN GTRPAKVKNM VWRLLSDSSA RVTALESGRV AAIEDVPYID VQKVGQKHKL EAAQSFGLLF LMFNCAEKPF DDKRVRQALH YAIDTDKVIQ TAMLGNAAAA TGYVQETHPA YAKASTVYGY DPDKAKALLK EAGVSGLNVT MVTTDTGWVK DAVPVIKEGW DAVGVTTTLD IGQSGGQYTN KVDPGKFQIL VAPGDPSVFG NDMDLLLRWF FDGLWPQKRF RWDGTKEAGK VLGLLDEAAK TGDAAEQKKL WAEAVDVIAE EAPLYPILHR KLPTAWNDKK LTGFRPIPTT GLSFLDVGLA
|
| |