Gene Sros_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2471 
Symbol 
ID8665757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2695135 
End bp2696727 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative ABC transporter periplasmic binding protein 
Protein accessionYP_003338190 
Protein GI271963994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.10018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCACC TCTCCGCCGC ACCCATGAAC CGTCGCGGTT TCCTGCAGTT CGTCGGGGCC 
GTGAGCGCCG CCACCGCCTT CACCGGCTCG CTGGCCGCCT GCTCCGGTCC GGAGTCCACC
ACGGGCCCCG CGCCGGCGGC CGCGGCGGAC ACGATCGAGG CGGGCATCTC CTACGCCCTG
TCGACCGGCT TCGATCCGAT GACCTCCTCC GGCGCGACGC CGGTCGCCGC CAACATGCAC
GTCTTCGAGG CGCTGTTCGA CCTCGACCCG GTGACCCGCG AGTCCTACGC CGCGCTGGCC
GCGCGCGACC TGGAGAAGGT GGACGACACG ACCTACAAGG TCGCGCTCCG CGACGGCGCG
ACCTTCCATG ACGGCTCCGC CGTGACGGCC GGCGACGTGG CCTTCAGCTT CCAGCGCGTG
ATGGACCCGG CCAACGCCTC GCTCATGGTG CAGTTCATCC CGTTCGTCGA GAGCGTCACC
GCCGCCGACG CCAAGACCGT CGAGATCAAG CTCAAGTACG CCTTCCCGCT GCTCAAGGAG
CGGCTCGCGG TCGTCAAGAT CGTGCCCAAG GCCCTCGTCG AGAAGGACAA GACCGCCTTC
GACGCCAAGC CCGTCGGTTC CGGCCCCTAC AGGCTGGTCG AGGCGACCAA GGAAGACAAG
ATCGTCTTCG AGCGGTGGGA CAAGTACAAC GGCACCCGCC CGGCCAAGGT CAAGAACATG
GTCTGGCGGC TGCTGTCCGA CTCCTCGGCC CGCGTCACCG CGCTGGAGTC GGGCCGGGTG
GCGGCGATCG AGGACGTCCC CTACATCGAC GTGCAGAAGG TCGGCCAGAA GCACAAGCTT
GAGGCCGCGC AGTCCTTCGG CCTGCTCTTC CTCATGTTCA ACTGCGCCGA GAAGCCCTTC
GACGACAAGC GCGTGCGCCA GGCGCTGCAC TACGCCATCG ACACCGACAA GGTGATCCAG
ACGGCGATGC TCGGCAACGC CGCCGCGGCC ACGGGTTACG TGCAGGAGAC CCATCCGGCC
TACGCCAAGG CCTCGACCGT CTACGGCTAC GACCCGGACA AGGCCAAGGC GCTGCTGAAG
GAGGCCGGCG TCTCCGGCCT GAACGTCACC ATGGTGACCA CCGACACCGG CTGGGTGAAG
GACGCCGTCC CGGTCATCAA GGAGGGCTGG GACGCCGTCG GCGTGACCAC CACCCTCGAC
ATCGGCCAGT CCGGCGGCCA GTACACCAAC AAGGTCGACC CCGGCAAGTT CCAGATCCTG
GTGGCGCCCG GCGACCCGTC GGTCTTCGGA AACGACATGG ACCTGCTGCT CCGCTGGTTC
TTCGACGGCC TCTGGCCGCA GAAGCGGTTC CGCTGGGACG GCACCAAGGA GGCGGGGAAG
GTCCTGGGGC TGCTCGACGA GGCGGCGAAG ACCGGCGACG CGGCGGAGCA GAAGAAGCTG
TGGGCGGAGG CGGTCGACGT CATCGCCGAG GAGGCGCCGC TCTACCCGAT CCTGCACCGC
AAGCTGCCCA CCGCCTGGAA CGACAAGAAG CTGACCGGCT TCAGGCCCAT CCCCACGACG
GGCCTGTCGT TCCTCGACGT CGGCCTCGCC TGA
 
Protein sequence
MPHLSAAPMN RRGFLQFVGA VSAATAFTGS LAACSGPEST TGPAPAAAAD TIEAGISYAL 
STGFDPMTSS GATPVAANMH VFEALFDLDP VTRESYAALA ARDLEKVDDT TYKVALRDGA
TFHDGSAVTA GDVAFSFQRV MDPANASLMV QFIPFVESVT AADAKTVEIK LKYAFPLLKE
RLAVVKIVPK ALVEKDKTAF DAKPVGSGPY RLVEATKEDK IVFERWDKYN GTRPAKVKNM
VWRLLSDSSA RVTALESGRV AAIEDVPYID VQKVGQKHKL EAAQSFGLLF LMFNCAEKPF
DDKRVRQALH YAIDTDKVIQ TAMLGNAAAA TGYVQETHPA YAKASTVYGY DPDKAKALLK
EAGVSGLNVT MVTTDTGWVK DAVPVIKEGW DAVGVTTTLD IGQSGGQYTN KVDPGKFQIL
VAPGDPSVFG NDMDLLLRWF FDGLWPQKRF RWDGTKEAGK VLGLLDEAAK TGDAAEQKKL
WAEAVDVIAE EAPLYPILHR KLPTAWNDKK LTGFRPIPTT GLSFLDVGLA