Gene Sros_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2088 
Symbol 
ID8665370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand- 
Start bp2242962 
End bp2243696 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, SARP family 
Protein accessionYP_003337816 
Protein GI271963620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.37571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCA GCGATCACCC TCCGCTACGG GTCACCCTCC TGGGCGGCTT CCGGCTGCTC 
GCCGGGGACG ACCGGGTGGC CGTCTCGGGC GGGTCCGAGC GCCTTCTGGC GTTCGTCGCC 
CTGTGCGGCC AGGCCGTGTC CCGGAACCTG CTGGCGGGGA CCCTCTGGCC CGAGGCGCCC 
GAGCGGCGCG CGTGCGCGAG CCTCCGGTCG GCCCTGGTCC GCCTGAACGG CGCCGGGCGG 
CGGCTGCTCA GTGTCGGCAC GACCGAGATA CGCCTGTGCC CCGAGGCCCA CGTGGACTTC 
CACGACGCCC GGTCCCTGGC CTACCGCATC CTCGACCCCA CCACGCCGAC CGGGAACCGG 
GACCTCAGCG CGGAGGCCGT CGGGCTCCTG TCGAACGGCC TGCTGCCCGG CTGGTACGAC 
GACTGGGCCG TTCTCGAGGC GGAGGAATGG CACCAGCGGC GGCTGCACGC CCTGGAGGCG 
CTGACCGACG ACTTCGTCGC GGCGGGCCGG TGCGCCGACG CGGTCGCCGC CGCCGGCGTC 
GCCGTACGCG CCGAGCCGCT GCGCGAAAGC GCCCGCGCCG CGCTCATCCG GGCCCATCTG 
GCCGAGGACA ACCAGGCCGA GGCGCTTCGG TGCTTCGAGC GCTACAGGCG TCACCTCCAG 
GCCGAGCTGG GCCTCCGGCC GACGCCGCGC CTGTGCGAGC TCGTCGCCGG GCTGCGCTCG 
GAGACACCGC CGTGA
 
Protein sequence
MESSDHPPLR VTLLGGFRLL AGDDRVAVSG GSERLLAFVA LCGQAVSRNL LAGTLWPEAP 
ERRACASLRS ALVRLNGAGR RLLSVGTTEI RLCPEAHVDF HDARSLAYRI LDPTTPTGNR 
DLSAEAVGLL SNGLLPGWYD DWAVLEAEEW HQRRLHALEA LTDDFVAAGR CADAVAAAGV 
AVRAEPLRES ARAALIRAHL AEDNQAEALR CFERYRRHLQ AELGLRPTPR LCELVAGLRS 
ETPP