Gene Sros_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2018 
Symbol 
ID8665300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2170461 
End bp2171771 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337749 
Protein GI271963553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.571015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.258757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGAT TCCCCCTGCT GGCCGCGGCG GCCGTGGCCA CCGCCTGCGC GACCGCCCTC 
GCCGCCGCGC CCGCGCTGGC CGCCCCCTCC CCCTCCCCTG CCTCCACGCA GACCGCCACC
ACGCGGGCCA CTCCGGCAGG TCCGACCAGG CCGGTCGAGG TCTTCGCCGA GGACGGCACC
ATCGCCCGCG CCGAGGTGCC CGCCTCCGCC GGGCCGAGGG CCCGCTCCCT CGCCACCGCC
GCCGCGAGGC TCACCCCCGT CGAGGTCAAC GGGCCGAGCG CGGACCGGAT CGACCTGGTC
TTCGTCGGCG ACGGCTACAC CGAGGCAGAA CTCGGCCTCT ACGCCGACCA GGTCGCCGCC
AAGTGGGCGC TGCTGGCCAA CCGGGAGCCC TTCAAGAGCT ACCGCGGGCT GTTCAACGTC
TGGCGGGTCG ACATCCCCTC GCCCGTGTCC GGCGTGAGCG GCGACCCCGC GCGCGACGTG
GTCAGGGACA CCCCGCTCGG GATGACCTTC TGGTGCGACG GCCTGGAGCG GCTGCTCTGC
GTGGACGAGG ACCGCGCGAA GGCCTACGCG GCGCTGGCGC CCGGCGTGGA CCAGATCGCG
GCGATGGCCA ACTCCGCCAA GTACGGCGGC GCGGGCTACA CCGACGAGGA GATGGCGACC
TTCTCCGGCG GCAACGAACG CGCCGGAGAG GTGCTGCCGC ACGAGCTCGG CCACTCCCTG
GGCGACCTGG CCGACGAGTA CGACTACTAC GCCTACCCGG GTGACGGCAG CCGCTACGAC
GGCCCCGAGT TCTCGGAGGT CAACGTCAGC GTCCGCGACG CCGGGCGGAT GCGGGCCGAG
CGGGCCAAGT GGTGGTACTG GCTCGGCGCG CCCAGCCCCG ACGGCGACGT CGTCGGCGCC
TACGAGGGCG GGTACTACAC CCAGTACGGC GTCTACCGGC CCACCCCCAA CTCGCTGATG
AAGTCGCTCG GCCGCGAGTT CAACTCGGTC GGCAGGGAGA AGATGATCCA GTCGTTCTAC
GCGATCGCCC GCCCGATCGA CTCCCACACG CCCAACGAGC GGCCGGTGGC GCGCAGGTCG
ACGCTCTCGG TGACCCTCGC CCCGGTCCCG ACGCTGTCGG TCCGCTGGTA CCGCGACGGC
AGGGAGCACC GGCCCTGGCG GGGCCGTACC TCGGTGGACG TCATCGGCAT GGGCAACGGC
GGCACCGTCA CCGCGGTCGT CACCGACGAG ACCGCCGACG TCCGCGACCC CGGCTACCGG
GAAGAGTTCC TGACACAGTC CGTCACCTGG ACCGTCCGCG GCAACCACTG A
 
Protein sequence
MRRFPLLAAA AVATACATAL AAAPALAAPS PSPASTQTAT TRATPAGPTR PVEVFAEDGT 
IARAEVPASA GPRARSLATA AARLTPVEVN GPSADRIDLV FVGDGYTEAE LGLYADQVAA
KWALLANREP FKSYRGLFNV WRVDIPSPVS GVSGDPARDV VRDTPLGMTF WCDGLERLLC
VDEDRAKAYA ALAPGVDQIA AMANSAKYGG AGYTDEEMAT FSGGNERAGE VLPHELGHSL
GDLADEYDYY AYPGDGSRYD GPEFSEVNVS VRDAGRMRAE RAKWWYWLGA PSPDGDVVGA
YEGGYYTQYG VYRPTPNSLM KSLGREFNSV GREKMIQSFY AIARPIDSHT PNERPVARRS
TLSVTLAPVP TLSVRWYRDG REHRPWRGRT SVDVIGMGNG GTVTAVVTDE TADVRDPGYR
EEFLTQSVTW TVRGNH