Gene Sros_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1912 
Symbol 
ID8665190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2035919 
End bp2036572 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337643 
Protein GI271963447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.235242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.708641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG CACCCGTCGT CCTCCCCCGC CTCACCGCCC TGGCCCGTCA GGCGGTTCCG 
AAGATCCTGG AGGGCGTCGT CGCCCCCCTC GCCGTCTTCT ACGCCGCGCT GGCCGTCCTC
GGTCTCACGG GCGCGCTGAT CGCGGCGGTG AGCTGGGTGT ACGCGGGAGT GGGGTGGCGG
CTGGTCCGGC GGGTCCCGGT GCCCGGGACG ATGATCCTCG CCGCCATCGC GATCACCGTC
CGGGCGCTGC TGGGGCTGTG GAGCGGGAGC GCGGTGCTCT ACTTCCTCCA GCCCGAGCTG
GGCACGATCT GCATCAGCAT GGTCTTCCTG GCCTCGGTGC GGCTCAACCG CCCGCTGGTG
CAGAAGCTCA CCCTCGACTA CATCCACCTG CCCACGGCGG TGCTGAAGCA CGAGCGGGTC
CGCCGGTTCT TCGCCCGGAT CACCCTGCTG TGGGCCTTCG TGCTGTTGGC CAACTCCGCG
GTGAGCATCT GGCTCCTGCT CCACCAGTCG ATCGGCACCT ACCTGCTGGT CCGCACCTCG
GTCGTCGCCC TGATCAGCGG CCTGGCGGTG GCCGTCTCCG TCTACGCCTT CCGCCGCGTC
CTGCGCCGCC TGCACCACGA CCCGGCCCCC GCCCCCGCCG CCTCCCCCGC CTAG
 
Protein sequence
MSHAPVVLPR LTALARQAVP KILEGVVAPL AVFYAALAVL GLTGALIAAV SWVYAGVGWR 
LVRRVPVPGT MILAAIAITV RALLGLWSGS AVLYFLQPEL GTICISMVFL ASVRLNRPLV
QKLTLDYIHL PTAVLKHERV RRFFARITLL WAFVLLANSA VSIWLLLHQS IGTYLLVRTS
VVALISGLAV AVSVYAFRRV LRRLHHDPAP APAASPA