Gene Sros_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1888 
Symbol 
ID8665166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2006446 
End bp2007615 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337619 
Protein GI271963423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC GACGTATCGA CGTGCTGGAC GTGCTCAGAG GTGTCGCCAT CATGGGCACG 
CTGGGCACCA ACATCTGGAT CTTCACCAGT CCCGCCGGCC CCGAGGGCCT GCTGGACGCG
CTGGGCCGGA CCGGGACCGT GGAGACCTTC CTCCGCTTCC TGGCCAACGG CAAGTTCCTG
GCCCTGCTCA CCCTGCTGTT CGGGGTCGGG CTGGAGCTGC AGTACCGCTC GGCCGCGCGC
CGGGGCGCGC CCTGGCCCGG CTGGTACCTG TGGCGGGCGG GACTGCTGTT CCTCGAAGGA
CTGATCCACT ATGTGCTGAT CTTCGAGTTC GACGTGCTCA TGGGCTACGC GCTGACCTCG
ATCATCGTGG CGTACCTGAT CGGCCGGAGC GACCGGGCGG TCAGGGCCTG GATGATCACC
GTGGGCTCGG TGTTCGCGGT GCTGGTCGGA CTGGTCACCC TCGCCCTGGC CTACGGCCGG
GCCGGCATGG CCCCGCCGGC CGCGGCGCCG TCCACGCTGT TCTCCGAGGG CTCCTACCTC
GACCAGGTCG CCGCCCGGAT CGAGCTGGTC GGCGTCTACC GGATCGAGGC CGTGTTCATC
GTCCCGATGG GGATCGTGCT GTTCCTGCTG GGCTCGCGGC TGATGCGCGC CGGGGTGTTC
GAGGAGTCCG GGCGGGGCGC CGCCCTCCGC CGGAAGCTCA TGGTCATCGG GTTCGGCGTG
GGCGCCCCGC TCAACCTGCT GACCTCCTTC GCCGGGGAGA CCTGGTTCCT GGTCGACCGC
TACCTGCTGC CCCCGCTGGT GGCGCTGGGC CTGCTCGCCC TGGTCACGAC GCTCGTGCAT
CGGATGGCCG GTGCTCCCGG CCTGCTGCGG CGGGGCCTGA CCAACGTCGG ACGCACCGCG
CTGAGCTGCT ACGTCTTCCA GAACCTGGCC GCCGCGGCGC TCTGCTACGG CTGGGGGCTG
GGGCTGGCCG CGGAGTTCGA CGAGCTGCGG CCGTGGTGGG TGGTCGCCGC CTGGGCGGGT
GTCTGCGCCC TGTTCATGGC GCTGTCCACG CTGTGGCTGC GCCGTTTCGA GCGGGGGCCG
CTTGAGCTGG TCTGGCAGTG GGCCTATACG GCACCCCAAT CCCATCTGCG GACAAATGAT
AAAGTAATGG ACAATTCCAT CAAGCGTTAG
 
Protein sequence
MTTRRIDVLD VLRGVAIMGT LGTNIWIFTS PAGPEGLLDA LGRTGTVETF LRFLANGKFL 
ALLTLLFGVG LELQYRSAAR RGAPWPGWYL WRAGLLFLEG LIHYVLIFEF DVLMGYALTS
IIVAYLIGRS DRAVRAWMIT VGSVFAVLVG LVTLALAYGR AGMAPPAAAP STLFSEGSYL
DQVAARIELV GVYRIEAVFI VPMGIVLFLL GSRLMRAGVF EESGRGAALR RKLMVIGFGV
GAPLNLLTSF AGETWFLVDR YLLPPLVALG LLALVTTLVH RMAGAPGLLR RGLTNVGRTA
LSCYVFQNLA AAALCYGWGL GLAAEFDELR PWWVVAAWAG VCALFMALST LWLRRFERGP
LELVWQWAYT APQSHLRTND KVMDNSIKR