| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1874 |
|---|
| Symbol | |
|---|
| ID | 8665152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1990086 |
|---|
| End bp | 1990796 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003337605 |
|---|
| Protein GI | 271963409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.546444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTT CCCAAGTGTC CTTCCGATAC TCACGCCGCA GCCCCTGGAT CCTGCGGGAC
GTCGAGCTCA CGCTCCGCCC GGGTTCCGTC ATCGAGGTCA CCGGCCGCAA CGGCGCGGGC
AAGTCCACCC TGCTGCGCCT GCTCGCCGGG ATCATCCCCC CGACCCGGGG CACGGTCGCC
GACCGGCCCC GCGTCGTCGG CTACGCCCCC GATGTCTTCC CCGTGGACCA GCCGTTCACC
GTCACCGCCT ACCTGACCCA CATGGCCAGG GTCCGGGGCG TCTCCCCCGC CTCGGCCGGC
GAGCTGGCCG GACGGCTGAA CGCCACCCAC CTGATGGACC AGCCGGTCGG CGACCTGTCC
AAGGGCAGCG CCCAGAAGGT CGGGCTGATC CAGTCGCTGC TGGCCCCACC CGGCCTGCTG
ATCCTGGACG AGCCCTTCGC CGGGCTGGAC GAGCAGACCC GCATCGAACT CCCCGTCATC
ATCGGCGAGA TCGCCGCGGG CGGCGGGACG GTCGTGGTCA GCGACCACCA GAACCAGCTC
CAGAACTTCC CGGGGGCCGA CCACTGGCTG GTCGGCGCCG GCGCGGTCAC CGCCCAGACC
GGCGAGCGGC CGGCACAGGC GGTCATCGAG GTGCTCGTGG ACGCCGCCGA GGCCGACGAG
GTCGAGCAGA AACTCCGCGC CGACGGCTAT ACCACCAGGC GGGCCTCGTG A
|
|---|
| Protein sequence | MRLSQVSFRY SRRSPWILRD VELTLRPGSV IEVTGRNGAG KSTLLRLLAG IIPPTRGTVA
DRPRVVGYAP DVFPVDQPFT VTAYLTHMAR VRGVSPASAG ELAGRLNATH LMDQPVGDLS
KGSAQKVGLI QSLLAPPGLL ILDEPFAGLD EQTRIELPVI IGEIAAGGGT VVVSDHQNQL
QNFPGADHWL VGAGAVTAQT GERPAQAVIE VLVDAAEADE VEQKLRADGY TTRRAS
|
|---|
| |