| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1795 |
|---|
| Symbol | |
|---|
| ID | 8665073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1914579 |
|---|
| End bp | 1916543 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter permease protein |
|---|
| Protein accession | YP_003337528 |
|---|
| Protein GI | 271963332 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.697698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC CACCCGCCGC GCTCTCCCCC GCCCAGGCGG CCCCGCCCGC CCGCCGCTCC
CGCGGGCCGC TGCCGCCCTG GCTGGCGCCG CTCGCCGGCG CGGCCGTGGC CGTGGCCGCC
TATCTGCTCT TCCGGGGCAC CGCGCCGCTG CCCCACGACG ACGACGCCGC ACAGTTCGGG
GCCGTCAACG ACGTGCGGGA CTGGGTGGAC GCCAACCGCA ACGAGAGCCC GGTCTTCCTG
TTCTTCGTCA ACTACGTGCG GCTGTCCGTC GGCGGGCTCT ACGACGTCCT CCACCTGGCG
CTGGACGGCC TCGGCTGGGC GGGGCTGATC GGGACCGCGG GCGCGCTGGG CCAGCTGGCG
GGCGGCTGGC GGATCGCGCT GGTCGCCGTG CTGGGAACCG GCTCGTTCGG GGTGCTGGGA
CTGTGGGAGG CGAGCGTCGA CACGCTCGCG CTCGTGCTCG CGGCGGTCCT GCTCTCGCTG
CTGATCGGCC TGCCGCTGGG CGTGGCCGCG GGCCGTTCGG TACGGCTGCG CCGCCTGCTC
ACCCCGGTCC TCGACGTCAT GCAGATCATG CCGACGTTCG CCTACCTGGC GCCGATGGTG
CTGTTCTTCC AGATCGGGCC CGCGTCGGCC GCGGTCGCCA CGATGATCTA CTCGATCCCT
CCGGCGATCA GGATCACCGC GCTGGCCGTC GAGCAGGTCT CCCCTGCCGC CGTCGAGGCC
TCCGCCTCGC TCGGCGCCAC CCGCCGGCAG ACGCTGCGCA AGGTCCACCT CCCGATGGCA
CGGGCCACGA TCGCGCTGGC GATCAACCAG ACCGTCATGA TGGCGCTGTC CATGGTGGTG
ATCGCGGCGC TGATCGCCGC ACCGGGGCTG GGCTCGGACA TCATCCGCGG GCTCTCCCGC
GCCGACGTGG GCGTCATGCT CCCGGCGGGC ATCGCCATCG TGGTGATGGC CGTCGTGCTG
GACCGGATCA CCATGGCCGC CGCGGCGCGC GAGCCGGTGC CGTCCGACGC CTTCTCCACC
CTGCTCCGGC TCTCCGTCCC CGCGGCGATC CTCGTGGTCA CCGGGATCGC GGCCCGCTTC
CTGCCCGCCG AGTTCCCCCG GGAGTGGGTG CTCCGCTTCG CCGGACCGGT GAACGAGGCG
GTGAACTGGG CCAAGTTCTC CTGGTACGGC GCCACCGAGG CGATCAGGAA CGGCGTCACC
GAAGCGCTCC TCAACCCCCT GCAGACCGTG CTCACCACCG CCCCCTGGTG GCTGGTCGCG
GCGGTCGTGC TCGCGGCCGG GTGGCGGGCC GCGGGCGCGC GCCCCGCGGC CGCCGCGGTG
GGCTGCCTGC TCGCCACGGC CCTGCTCGGG CTCTGGCAGC ACACCATGGA GACGCTCACC
ACCGTGCTGG CCGGGGTGGT GCCGGCCCTG GTCGCCGGGC TCGCGCTCGG CGTCGCGGCG
GCCCGCTCCC CCCGGTTCGC CGCCGTGCAA CGGCCGCTGC TCGACACCGC GCAGACCATG
CCCGCCTTCG TCTACCTGCT GCCCGCGCTG GCGCTGTTCG GCGCGACCCG GTTCACCGCG
ATCTTCGCCT CGGTGATCTA CGCGGTGCCG CCGGTCGTCC GGCTGGTGGA GGACGGGATC
AGGAACGTGT CCCCGGTCGC CGTGGAGGCC GCGCGCTCCT GCGGCTCCAC CGACCGGCAG
CTGCTGTGGA AGGTGCGGCT GCCGATGGCC CGCCGGGCGA TCCTGCTCGC CGCCAACCAG
GGCATCGTCA TGACGCTCGC CATGGTCGTG GTCGGCGGGC TGGTCGGCGC GGGCGGCCTG
GGCTACGACG TCGTCTCCGG ATTCTCCCAG CACACCGACT TCGGCATGGG CTTCGCCGCC
GGGGTCGCCA CGGTGCTGCT CGGGATCATG CTCGACCGGA TCACACAGGG CGCCGATGGG
TGCCCCTCCC CCCGAAAGTC CCCCCGAAAG AAGAGGATCG CATGA
|
|---|
| Protein sequence | MTSPPAALSP AQAAPPARRS RGPLPPWLAP LAGAAVAVAA YLLFRGTAPL PHDDDAAQFG
AVNDVRDWVD ANRNESPVFL FFVNYVRLSV GGLYDVLHLA LDGLGWAGLI GTAGALGQLA
GGWRIALVAV LGTGSFGVLG LWEASVDTLA LVLAAVLLSL LIGLPLGVAA GRSVRLRRLL
TPVLDVMQIM PTFAYLAPMV LFFQIGPASA AVATMIYSIP PAIRITALAV EQVSPAAVEA
SASLGATRRQ TLRKVHLPMA RATIALAINQ TVMMALSMVV IAALIAAPGL GSDIIRGLSR
ADVGVMLPAG IAIVVMAVVL DRITMAAAAR EPVPSDAFST LLRLSVPAAI LVVTGIAARF
LPAEFPREWV LRFAGPVNEA VNWAKFSWYG ATEAIRNGVT EALLNPLQTV LTTAPWWLVA
AVVLAAGWRA AGARPAAAAV GCLLATALLG LWQHTMETLT TVLAGVVPAL VAGLALGVAA
ARSPRFAAVQ RPLLDTAQTM PAFVYLLPAL ALFGATRFTA IFASVIYAVP PVVRLVEDGI
RNVSPVAVEA ARSCGSTDRQ LLWKVRLPMA RRAILLAANQ GIVMTLAMVV VGGLVGAGGL
GYDVVSGFSQ HTDFGMGFAA GVATVLLGIM LDRITQGADG CPSPRKSPRK KRIA
|
|---|
| |