Gene Sros_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1772 
Symbol 
ID8665050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1886747 
End bp1888474 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337505 
Protein GI271963309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.100402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGAGA CCGCCTCCTG GCGACTTCTG TTCGCCTACG TCCGCCCGCA CAGACGGGCC 
CTGCTCCTCG GTGGTGTCCT CAGCCTCGTC GGCTCGCTGG CCGGGCTCGC GATGCCGCTT
CTCGCGAAGG TGGTCATCGA CGCCTTCGGC GAGCAGCGCT CCCTGGTCGG GCCGGTGCTC
GGCCTGACGG CCGCCGTCCT CCTGGGCGCG GCCGTCGGCG CGCTCGGCAG ATACGTGCTG
GAGCGTATGG GCGAGGGCGT CGTGTTCTCC GCCCGGCGGA GCCTGGTGGA CCGGATGCTG
CGGCTGCGGG TCTCGGAGGT GGACCGGCTC AAGCCCGGCG ACCTGCTGTC GCGGGTGACC
TCGGACACCA CCCTGCTCCG GGCCGTGTTC ACCGACGGTG TCGTCGAGAC GGTCAGCGCG
GTGTTCATGC TTGTGGGCGC CGTGGTGATG ATGGCGATCA TGGATGGGCT GCTGCTGCTC
ATCACGCTGA CGGTCCTGAT CCTGGTCGGC TCCCTCGTGG GCCTGGTCAT GCCGCGCATC
CGGCGGGCCT CGACGCAGGC GCAGGTCGCG GTGGGCGAGA TGGGCGCGGT GCTCGACCGG
GTCCTGCAGG CGTTCCGCAC GGTCAAGGCC AGCGGCGCCG AGGACCGCGA GATCGCCACG
GTGGGAGCGG CGGCCCGCGA GGCGCGGGAC CGGGGCGTCG CGGTCGCCTG GTGGACCTCG
ATCGCCGGCA TCTCCGCGTG GGTCTCCGCG CAGCTCGCCT TCGTGGCCGT GCTCGGCGTG
GGCGGCGCCC GGGTCGCCTC CGGCGCACTG GAGGTCTCCT CGCTGATCGC CTTCCTGCTG
TACCTGTTCT ACCTGGTGGC CCCGATCGGC CAGATGGTCC AGGGCGTCAC CCAGATGCAG
AACGGCCTGG CGGCGGTGAA GCGGATCCGC GAGATCGAGG AGCTCCCCGC CGAGGAGGCC
GCCGACGCGG CTGGCACGGT CGGCACGGCT CCGGCGGGGG TGAGCTTCGA GGGCGTGGCC
TTCCGCTACG GCGACGACCG GCCGGTCGTC CACCACGACG TCTCCTTTAC GGTCCCGGCG
GGCGGCATGA CCGCGCTCGT CGGCCCGTCC GGGGCGGGCA AGTCCACGGT CTTCGCCCTG
CTCGAACGGT TCTACGAGCA GCAGTCCGGG ACGATCTCCG TCGACGGCCG TGACATCGGG
CAGTGGCCGC TGGGCCGGCT GCGCGCCTCC CTGGGCTATG TGGAGCAGGA CGCGCCGGTG
CTGGACGGCT CGCTCAGGGA GAACCTCGTC TTCGCCGCGC CGGAGGTGGG CGAGGCCGAG
ATCCGGCGGG TGCTCGCGCT GACCCGGCTG GAGGACCTGG TCGCCCGGCT CCCCGAAGGG
CTGGAGACCA AGGTCGGTCA TCGCGGGATC ATGCTCTCCG GGGGTGAGCG CCAGCGGGTC
GCCATCGCGC GCGCCCTGCT GCGCCGTCCC CGGCTGCTCC TGCTCGACGA GGCCACCTCC
CAGCTCGACG CGGTCAACGA GCTGCGGCTC CGCGAGGTGA TCGCCGAGGT GGCCAGGGAG
ACGACCGTGC TGGTGATCGC CCATCGCCTG TCCACGGTGA CCACCGCCGA CCGGATCGTG
GTGATGGAGG CGGGCCGGGT GCGGGCCGTC GGGACCCACA GTGAGCTCCT CGACGGCGAC
GATCTCTACC GTGAGCTGGC CGCCACCCAG TTCCTGCTGC CGACGTAG
 
Protein sequence
MPETASWRLL FAYVRPHRRA LLLGGVLSLV GSLAGLAMPL LAKVVIDAFG EQRSLVGPVL 
GLTAAVLLGA AVGALGRYVL ERMGEGVVFS ARRSLVDRML RLRVSEVDRL KPGDLLSRVT
SDTTLLRAVF TDGVVETVSA VFMLVGAVVM MAIMDGLLLL ITLTVLILVG SLVGLVMPRI
RRASTQAQVA VGEMGAVLDR VLQAFRTVKA SGAEDREIAT VGAAAREARD RGVAVAWWTS
IAGISAWVSA QLAFVAVLGV GGARVASGAL EVSSLIAFLL YLFYLVAPIG QMVQGVTQMQ
NGLAAVKRIR EIEELPAEEA ADAAGTVGTA PAGVSFEGVA FRYGDDRPVV HHDVSFTVPA
GGMTALVGPS GAGKSTVFAL LERFYEQQSG TISVDGRDIG QWPLGRLRAS LGYVEQDAPV
LDGSLRENLV FAAPEVGEAE IRRVLALTRL EDLVARLPEG LETKVGHRGI MLSGGERQRV
AIARALLRRP RLLLLDEATS QLDAVNELRL REVIAEVARE TTVLVIAHRL STVTTADRIV
VMEAGRVRAV GTHSELLDGD DLYRELAATQ FLLPT