Gene Sros_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1682 
Symbol 
ID8664959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1796750 
End bp1797355 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003337416 
Protein GI271963220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.546444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAC GATCATACAG AGGAATGTCA GCGGAGGAGC GGCTGGCGGA GCGCCGGGAG 
CGCTTGATCA CCGCGGCGTA CACGCTCTAC TCCGACCCCG GTTTTCCGGA GACCACGATC
GAGAAGCTGT GCGCCGCGGC CCGCATCTCC AATCGTGCCT TCTACGAGTG TTTCTCCGGC
CGTAACGAGT TACTGCAGGC GGTGCACGAC AGATGTGTGC AGGAGACGCT GTTGTCGGTG
TCGAAGTCCA TCGAGCAGGC CCCGGACACG CTGCTCAGCC GGGTCGAGGC GGGCATCGCC
GGATATATCG GCTTCGTCAC CGAGGACAGG CGCCGTGCCC GGATCATGCA CCTGGAGGTG
CGCCGGGCGG GCGACTGCCT CACCAGGTCG CGGCAGCAGG CGGTGGCGGC CTTCAGCCAG
ATCATCGAGG CCAACGTCTT CGACCTGCCG GGGGCGGTCA AGGCCAACCA GCGCCTGCTG
GCACTGGGCA TGATCGGCGC CATCCAGGAG CTGCTCATCG AGTGGGTGCT GGCCGACGAC
CCGCCCGCGG TCGATCACCT GATCAGCACC GCCGTGCACA TCTTCTACCG GTCTTTCGTC
ACGTGA
 
Protein sequence
MNGRSYRGMS AEERLAERRE RLITAAYTLY SDPGFPETTI EKLCAAARIS NRAFYECFSG 
RNELLQAVHD RCVQETLLSV SKSIEQAPDT LLSRVEAGIA GYIGFVTEDR RRARIMHLEV
RRAGDCLTRS RQQAVAAFSQ IIEANVFDLP GAVKANQRLL ALGMIGAIQE LLIEWVLADD
PPAVDHLIST AVHIFYRSFV T