Gene Sros_1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1618 
Symbol 
ID8664895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1725648 
End bp1726535 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID 
ProductZn-dependent protease-like protein 
Protein accessionYP_003337352 
Protein GI271963156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA CTGTTCTTGA CACCTACTCC GCTATGAAGC AGATCCTGCG GGCTCCGGTC 
GCGGACCGCG TTGACCTGCT GCGTTCGATG CTGGAAGCCA ACAAGGGCAT GTACCGCTAC
CACCCCGGCG AGCTCGACCT GGTAGCCGTA CACCTCCAAT CGTCCGGGTT CCCCATCGAC
CGCGACGAGG AGCGTTGCCT CGACGCGCTC GAAACCCTGG CGGCGGCCGG CGCCTGGGAG
CGGATGCAAC GCGCGCTCGA CGACGCTCTC GCCGTACTGC TGGAGGCGAC GCCGGGGCTG
GAGGCCCCGG ACATCACCGT GCTGTTCGTC CTCGGCGATC CGGGTGACAA GCACTTCATG
GGTCCCTGCA AAGGATTGAC CGGGTTCGGC GGCATCTCGG GCAACATCGC CATCACGTTC
TGGCCCTTCC CCGAGAACGT GGAGCGGCTG GAGGCCACCG CCGTGCACGA ACTGCACCAC
AACCTGCGGT GGAGCCCGGG CGGGGTCGTG TGGGACCCGA TGACCGTCAC GGTCGGCGAG
CACATCGTCG GCGAGGGCCT GGCCGACGCC TTCGCCCGCC AGCTCTACGG CGACGAGCTC
GGCCCCGCCC GCATCGGCGT GCCGCACCTG CACGACGACG AGGTCTTCGC CAAGGTGCTC
ACCGGGCTCG ACGTGACAGG CATGCAGAAC TTCACTGCCT GGGTGCACGG CGACCCCGGC
GCCGAGCACC TCGGTGTCAC CCCGGTGGGA CTGCCGATGG GCGCCGGGTA CGCCGCGGGC
AACCGGCTGG TCGACACCTA CCTGGCGGCG ACGGGACAGA CGGCGGCGCA GGCCCTGCAC
GCCGACAGCG CCAAGATCAT CGCGGCCACG CTCCACAGCG AGAGCTGA
 
Protein sequence
MSITVLDTYS AMKQILRAPV ADRVDLLRSM LEANKGMYRY HPGELDLVAV HLQSSGFPID 
RDEERCLDAL ETLAAAGAWE RMQRALDDAL AVLLEATPGL EAPDITVLFV LGDPGDKHFM
GPCKGLTGFG GISGNIAITF WPFPENVERL EATAVHELHH NLRWSPGGVV WDPMTVTVGE
HIVGEGLADA FARQLYGDEL GPARIGVPHL HDDEVFAKVL TGLDVTGMQN FTAWVHGDPG
AEHLGVTPVG LPMGAGYAAG NRLVDTYLAA TGQTAAQALH ADSAKIIAAT LHSES