Gene Sros_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1563 
Symbol 
ID8664840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1660542 
End bp1661342 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID 
Productshort-chain alcohol dehydrogenase 
Protein accessionYP_003337299 
Protein GI271963103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.147181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCC TGAAGGACAA GGTCGCGATC ATCACCGGCG CGGGCAGCGG GATCGGCCTG 
GCCGCGGCGG AGTTGATGAG CCGCGAGGGC GCCCGCGTCC TCGTGGCGGA CTACGACGCC
GCATCGGCCG AGAGTGCCGC CGCCACCATC ATCGAGGCGG GTGGCCAGGC GGTGCCGTGC
GCGGTGGACG TCATGGACGA CACGTCCGTG GGCGACATGG TGGAAGCGGC CGTGCACGAG
TTCGGGCGGC TGGACGTGCT CTGCAACCAC GTGGGCGGGA CGGACCCGCG CAAGGATCTC
GACCTGCTCC GCCTCGACAT GGAGGAGTTC AGCCGGGCCG TCGACCTCAA CGTCCGCTCC
ACCCTGACGG GCTCCCGGCA CGCCGTCCCG CACATGATCC GGGCGGGCGG TGGCTCGATC
ATCAACACCG CCTCGGTGGC CGGCCTGGTC GGCGACGTAC TCCAGATCTC CTACGGAGCG
GTAAAGGCGG CGGTCATCAA CATCACCAAG TCCATCGCCG TCCAGTACGG CCCGCAGGGC
ATCCGCTGCA ACGCGGTGGC CCCGGGAGCG ATCATGACCC CGGCGCTTCT GGACAACCTT
CCCGCCGAGG TGATCGAGGC GCTGAAGGGA TACAACGCGC TTCCCTACCT TGGCGCTCCC
GAGGACATCG GCTACACCAT GGTCTTTCTC GCCTCCGACG AATCCCGCTA TCTGACCGGA
CAGCTTCTGG TGGTGGACGG AGGAATGACC AGCCAGTCCC CTGCCGCTCC CGGACGCCGC
GCGATGCTCC CCACAGCATG A
 
Protein sequence
MNRLKDKVAI ITGAGSGIGL AAAELMSREG ARVLVADYDA ASAESAAATI IEAGGQAVPC 
AVDVMDDTSV GDMVEAAVHE FGRLDVLCNH VGGTDPRKDL DLLRLDMEEF SRAVDLNVRS
TLTGSRHAVP HMIRAGGGSI INTASVAGLV GDVLQISYGA VKAAVINITK SIAVQYGPQG
IRCNAVAPGA IMTPALLDNL PAEVIEALKG YNALPYLGAP EDIGYTMVFL ASDESRYLTG
QLLVVDGGMT SQSPAAPGRR AMLPTA