Gene Sros_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1511 
Symbol 
ID8664787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1594411 
End bp1595157 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID 
ProductPhage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein 
Protein accessionYP_003337247 
Protein GI271963051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0177889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG TCATCCGCCG GGCCTGGCGC TACATGGTCT TCGCCCTGTC CGGCCGGTTG 
GACGAGCTGT CCGACCCGCG GATCCAGATC GAGCAGGCCA TCCAGGAGGC CAAGGAGCAG
CACCAGCGGC TGTCCCAGCA GGCGGCCGCG GTCATCGGCA ACGAGCGCGA GCTGGAGATG
AAGCTCGCCC GCTCGCTGGA GGAGACCGAG AAGCTCCAGG CCAACGCCCG CCAGGCGGTC
CTGCTGGCCG ACCAGGCGCG GGCCGCGGGC GACGAGCGCA AGGCGCTGTC CTACGAGGAC
TCCGCCCGCG CCTTCGCCTC CCGGCTGGTG GCGGCCGAGA CCGCGATGGG GGACGTCCAG
CTCATGCACG AGCGGGCCAG GCAGTCCTCC GCCCAGGCCC GCGCGGCGGT CGAGAACAAC
GCCATGGCCC TGCAGAAGAA GATCGCCGAG CGGATGCGCC TGCTCTCCCA GCTCGACCAG
GCCAAGATGC AGGAGCAGCT CAACAAGGCC ATGGGCGACC TGTCCGGCCT CACCCCCGCC
GGCGACACCC CGACCATGGA CCAGGTCCGC GAGAAGATCG AGAAGCGCTA CGCCCGCGCC
CTCGGCGAGG CCGAGCTGAC CTCCAACTCC GTCGAGGCCC GGATGATCGA GGTCGAACGC
GCCGCCATCG ACGTCGAGGG CGCCGCCCGC CTGGAGGCCA TCAAGGAGAG CCTCCGCCAG
GACCGCAAGC CCGAGGTGGA GAGCTGA
 
Protein sequence
MFKVIRRAWR YMVFALSGRL DELSDPRIQI EQAIQEAKEQ HQRLSQQAAA VIGNERELEM 
KLARSLEETE KLQANARQAV LLADQARAAG DERKALSYED SARAFASRLV AAETAMGDVQ
LMHERARQSS AQARAAVENN AMALQKKIAE RMRLLSQLDQ AKMQEQLNKA MGDLSGLTPA
GDTPTMDQVR EKIEKRYARA LGEAELTSNS VEARMIEVER AAIDVEGAAR LEAIKESLRQ
DRKPEVES