Gene Sros_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1439 
Symbol 
ID8664714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1504464 
End bp1505180 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative phosphoglycolate phosphatase 
Protein accessionYP_003337176 
Protein GI271962980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.608138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0945263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTAGCCGGC TCGTTCTCTG GAACGTCGAT CTCACGCTGG TCGATGTGTC CATCATCACC 
CGCGAGGCGT ACGCGGACGC CTTCCGGAAG GTCACCGGGC GGCCTCTGGT CAAGCTGACC
CAGCACAACG GCCGCCCGGA CTCGGAGATC GTCTTCGAGA CGCTGGCCAT CAACGGGATC
GTCGCCGAGG ACGACCACCT CCCCGAGTTC CTGGAGGCGC TGGGCGAGGC CTTCGGAGCG
CGGCGCAAGC GCCTGACCAA GGACGGCCGG ACGATGGCCG GGGCGGCGGA CGCGCTGAAG
GCCGTGGCCA GGCTCGACGG CACGGTCCAG TCGGTGCTCA CCGGCACGAT AAAGAGCAAC
GCCGTGCACA AGCTGACCGC CTTCGGCCTG GACAGGCACG TGGACTTCGA GGTCGGCGGC
TACGGCGAGG AGGTCTACCC CAAGGCCACC CTGCTCCAGG TCGCGCAGGG CCGGGCCAGG
CAGAAGTACG GCGGCACCTT CGACGGCGGC AACACCGTGA TGATCGGCGA CTCGGCCAGG
GACGTCCAGG CCGCCAGGAT CGCCGGGGCG TCGATGATCG CGGTCGCCAC CGGCCGCTCC
CTCCCGGCCG AGCTCCACGA GGCGGGGGCC GACGTGGTCC TGCCCGACCT GTCCAACCCG
TCGGAGGTCG TCGCGGCCGT GGCCGGGCTC ACCTCACCGG CCCGCAAGGC CGGTTAG
 
Protein sequence
MSRLVLWNVD LTLVDVSIIT REAYADAFRK VTGRPLVKLT QHNGRPDSEI VFETLAINGI 
VAEDDHLPEF LEALGEAFGA RRKRLTKDGR TMAGAADALK AVARLDGTVQ SVLTGTIKSN
AVHKLTAFGL DRHVDFEVGG YGEEVYPKAT LLQVAQGRAR QKYGGTFDGG NTVMIGDSAR
DVQAARIAGA SMIAVATGRS LPAELHEAGA DVVLPDLSNP SEVVAAVAGL TSPARKAG