Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1313 |
Symbol | |
ID | 8664588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1357383 |
End bp | 1360292 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003337054 |
Protein GI | 271962858 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.489713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGC GACAGCCCAT GCGCATCAGG CCCAGGCGCA CCGCGGGTGA CCTGTTCGCC GGACTCGGCG CGCTGGTCGT GCTGGCCGCG CTCCTCGGCG GGGTCCCCTA CGCCCTGCTC AGGCTGGCCG GGCCGCCGCT CCCGCCCGAG CTGCTCGACA TCGATCTGCT GACCAGCCCG GTCGGCACGG GCACGATCGT GGCGATCCTC GTGCTGCTGG TCTGGCTGGC GTGGCTGCAG CTGACCGTCT GCGTGATCGT CGAGGTCTAC GCCGGGCTGC GGCGGGTCGG CATGCCGGCC AGGGTCCCGC TCTCCGGGGG CACCCAGGTC CTGGCCAACC GGCTGGTCTC GGCCGTGCTG GTGCTGTTCA CCATGTCGGC GGTGGTCGTG CCGATCGCGA AGGCGGGGGG CACGCCGGCC GCCGGTCCCG CCGTCGCCTC CGTCGCGCTG TCCGCGCCGG TCGCCGAGGA GCGGGCGCCA CTGGTGCCGG TGGAGAAGGC CAAGAAGGTC TACGTGGTGC AGCCGCCGCA CGGGCGGCAC CACGAGAGCC TGTGGGAGAT CGCGGAGAAG TGCCTCGGCG ACGGGCGGCG CTATCCGGAG ATCTACCGGC TCAACCAGCA CAAGGAGCAG CCCGACGGCA GCCGTCTCCA CATGGCCGAC CTGATCAGGC CCGGCTGGGT GCTGGACATG CCGGCCGACG CCAGGAACAT CCACCTCGTC CCGGCCGCCC AGCCCCGCGA CGCGACCCTC AAGGAGCACC CCGACAGGCC GGCGGAGCTC GACGGCCGCA CCCGGACCTT CACCCCGGGC CGCGCGGATC TCCCGGTGGA GTCCCGCCCG GAGGTCTCCC GGCCCTCGGA CACCTCCGTC GTCCCCGGCG ACGGGAGGAC CGGCCCCGCC GAGACGCGCA GGGCCCCCTC GGACACCTCC CGGCGGTCCC CGCAGGAGAC CGCCACCGCG CGGGAGCCCC GCGCGGCCGA CGACTCCGGC CGCACCGGGC GGCAGACCTC GGAGGGCGGC ACCGGGCGCG ACCCGTCCGT GGCCGCCGAC CCCGGCGGCA GGGCCGGCCA GGCCGGGCAG GACTCCGGGC TGGAGATGCT CGACTACCTG GCGGTGGCCT CGCTGGCGGC GGCCGGGCTG CTGGCGGCGC TCGGCCGCCG GCGCAGGCGG CAGCTGTGGT ACCGGGCGTT CGGGCACCGG ATCGCCCGGC CGAGGGGCGA CGCGGCCCAG GCCGAGCTCG CGCTCCGGCT GGGCGCCGAC GCGCCGGGAA GCCGGATGCT GGACATCGGG CTGCGGCTCC TGGGCAGGTC CCTCGCGGCC CGGGACCGCG TCCCGCCCAC GATCTACGCC GCGCACCTGT CCCCGCACAC CCTCGACCTG TGGATCCACC CGCCCGACCT CGACGCCCCC GCGCCCTGGG CCGCCCACGA CGGCGGCCAG GTGTGGCGGC TGCCGGCCCA CGAGGGCCGG ATGCTCGACG AGCAGGCGCT CGCCGGCGCG CCCGCGCCGT ACCCGGGCCT GGTCTCGCTG GGGTCCAACG GTGAGGGCCG GGTGCTCGTC GACCTGGAGG CGGCCCACGG GCTGATCAGC CTCAAGGGCC CCCAGAGCAC CGCCGCCCTC GCCGCGCTCG CGGTGGAGCT GGCCACCAAC CGCTGGTCGG ACCGGATGCT CGTCACGCTC GTCGGTTTCG GGGAGGAGCT CGCCGTGATC GCCCCCGACC GCATCCGCTG CGTGGGCGGC CTCGCCGAGA TCCTGCCCGA GCTGGAGGCC ACGGCCGAGG AGCGCGGCGC CGGCGGCGAG GTGCTCACCG GCCGGATCCA CGGCCGCGCC GCCGACCCGA TCTGGCCGCC GCACTACGTG CTGTCCGCGG TGGTCCCGAG CGCGGAGGAG GGCCGCCGTC TGGCGGTGCT CGCCAGGAAG GGCGTCCGTA CGGCCGCCGG CTACGTCGTG GCGGGTGACG TCCCGCACGC CACCTGGAAC TGGGAGATCA CCGAGGACGG CCGGGCCACG GTGGACGCGC TCGGGTTCGA GGTGGCCGCG CAGCTCCTGC CCCGCCGCCA CTACCGGGCC CTGATCGACC TGTTCCACAC GGCCGGGCGG CTCGACGGGG AGCTTCTGCC CGACGAGCGG GAGCCGGTCC CGCAGACGCC CTCGATCGAG GTGCGGGTCC TCGGCCCGGT CGAGATCACC GGCCCGCCGC CGATGGAGGA GGGCCGGGCC GTGCTCGCCG TCGAGCTCGT CGTCTACCTG GCGACCCACC CGGGAGGCGT CCACCCGGTC GTGCTCGGCG GAATCCTCTG GCCGAGGGGC GTGCAGTCGG TGGTCCGGGA CGCCACGATC GCCCGGGTCG TCGACTGGCT GGGCGTCGAC AGCGCCGGGC GGCCCAACCT CTACGCCGAC GAGTCGGGGC GGCTCCGTCT CGGGCCCGAG GTGCGGACCG ACTGGATGCT CTTCCGCGAG TTCGTCCGCC GGTCGCACGC GGACCCCGCC GTGCGCACCG TACTCCTGGA GAGGGCCCTG AACCTGGTGC GCGGCCCGCT GTTGAACGGA CGTCCGCGCG GCCGGTACTC CTGGCTGGCC GCCGACGACC TGGAGTACGA CGTGACCGCC GGTGTCGCGG ACGCCGCCCA CCGGCTCTGC GAGATGCGGC TGGCGAACGG CGAGGCCGCC CAGGCCGTCG CGGCGGCGCG GGCCGGGCTG CTGCTGGCCG CCGACGACGA GGCGCTCTGG CGGGACCTGC TGCGGGCCAC CCATCTGACC GGGGACCCGG GCCGCCTGCG AGCCGTGGCC GACGCCCTGA ACCGGCGGGC CGGCTCCCAC CCCGACGGCG GCGGGATGGC GCCGGAGACG GAGGCGCTCA TCGACGAGCT GCTGCCCTCG TGGCGGATGC GTTCGGCGCC GTCGGCATGA
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Protein sequence | MPTRQPMRIR PRRTAGDLFA GLGALVVLAA LLGGVPYALL RLAGPPLPPE LLDIDLLTSP VGTGTIVAIL VLLVWLAWLQ LTVCVIVEVY AGLRRVGMPA RVPLSGGTQV LANRLVSAVL VLFTMSAVVV PIAKAGGTPA AGPAVASVAL SAPVAEERAP LVPVEKAKKV YVVQPPHGRH HESLWEIAEK CLGDGRRYPE IYRLNQHKEQ PDGSRLHMAD LIRPGWVLDM PADARNIHLV PAAQPRDATL KEHPDRPAEL DGRTRTFTPG RADLPVESRP EVSRPSDTSV VPGDGRTGPA ETRRAPSDTS RRSPQETATA REPRAADDSG RTGRQTSEGG TGRDPSVAAD PGGRAGQAGQ DSGLEMLDYL AVASLAAAGL LAALGRRRRR QLWYRAFGHR IARPRGDAAQ AELALRLGAD APGSRMLDIG LRLLGRSLAA RDRVPPTIYA AHLSPHTLDL WIHPPDLDAP APWAAHDGGQ VWRLPAHEGR MLDEQALAGA PAPYPGLVSL GSNGEGRVLV DLEAAHGLIS LKGPQSTAAL AALAVELATN RWSDRMLVTL VGFGEELAVI APDRIRCVGG LAEILPELEA TAEERGAGGE VLTGRIHGRA ADPIWPPHYV LSAVVPSAEE GRRLAVLARK GVRTAAGYVV AGDVPHATWN WEITEDGRAT VDALGFEVAA QLLPRRHYRA LIDLFHTAGR LDGELLPDER EPVPQTPSIE VRVLGPVEIT GPPPMEEGRA VLAVELVVYL ATHPGGVHPV VLGGILWPRG VQSVVRDATI ARVVDWLGVD SAGRPNLYAD ESGRLRLGPE VRTDWMLFRE FVRRSHADPA VRTVLLERAL NLVRGPLLNG RPRGRYSWLA ADDLEYDVTA GVADAAHRLC EMRLANGEAA QAVAAARAGL LLAADDEALW RDLLRATHLT GDPGRLRAVA DALNRRAGSH PDGGGMAPET EALIDELLPS WRMRSAPSA
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