Gene Sros_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1313 
Symbol 
ID8664588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1357383 
End bp1360292 
Gene Length2910 bp 
Protein Length969 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337054 
Protein GI271962858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.489713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGC GACAGCCCAT GCGCATCAGG CCCAGGCGCA CCGCGGGTGA CCTGTTCGCC 
GGACTCGGCG CGCTGGTCGT GCTGGCCGCG CTCCTCGGCG GGGTCCCCTA CGCCCTGCTC
AGGCTGGCCG GGCCGCCGCT CCCGCCCGAG CTGCTCGACA TCGATCTGCT GACCAGCCCG
GTCGGCACGG GCACGATCGT GGCGATCCTC GTGCTGCTGG TCTGGCTGGC GTGGCTGCAG
CTGACCGTCT GCGTGATCGT CGAGGTCTAC GCCGGGCTGC GGCGGGTCGG CATGCCGGCC
AGGGTCCCGC TCTCCGGGGG CACCCAGGTC CTGGCCAACC GGCTGGTCTC GGCCGTGCTG
GTGCTGTTCA CCATGTCGGC GGTGGTCGTG CCGATCGCGA AGGCGGGGGG CACGCCGGCC
GCCGGTCCCG CCGTCGCCTC CGTCGCGCTG TCCGCGCCGG TCGCCGAGGA GCGGGCGCCA
CTGGTGCCGG TGGAGAAGGC CAAGAAGGTC TACGTGGTGC AGCCGCCGCA CGGGCGGCAC
CACGAGAGCC TGTGGGAGAT CGCGGAGAAG TGCCTCGGCG ACGGGCGGCG CTATCCGGAG
ATCTACCGGC TCAACCAGCA CAAGGAGCAG CCCGACGGCA GCCGTCTCCA CATGGCCGAC
CTGATCAGGC CCGGCTGGGT GCTGGACATG CCGGCCGACG CCAGGAACAT CCACCTCGTC
CCGGCCGCCC AGCCCCGCGA CGCGACCCTC AAGGAGCACC CCGACAGGCC GGCGGAGCTC
GACGGCCGCA CCCGGACCTT CACCCCGGGC CGCGCGGATC TCCCGGTGGA GTCCCGCCCG
GAGGTCTCCC GGCCCTCGGA CACCTCCGTC GTCCCCGGCG ACGGGAGGAC CGGCCCCGCC
GAGACGCGCA GGGCCCCCTC GGACACCTCC CGGCGGTCCC CGCAGGAGAC CGCCACCGCG
CGGGAGCCCC GCGCGGCCGA CGACTCCGGC CGCACCGGGC GGCAGACCTC GGAGGGCGGC
ACCGGGCGCG ACCCGTCCGT GGCCGCCGAC CCCGGCGGCA GGGCCGGCCA GGCCGGGCAG
GACTCCGGGC TGGAGATGCT CGACTACCTG GCGGTGGCCT CGCTGGCGGC GGCCGGGCTG
CTGGCGGCGC TCGGCCGCCG GCGCAGGCGG CAGCTGTGGT ACCGGGCGTT CGGGCACCGG
ATCGCCCGGC CGAGGGGCGA CGCGGCCCAG GCCGAGCTCG CGCTCCGGCT GGGCGCCGAC
GCGCCGGGAA GCCGGATGCT GGACATCGGG CTGCGGCTCC TGGGCAGGTC CCTCGCGGCC
CGGGACCGCG TCCCGCCCAC GATCTACGCC GCGCACCTGT CCCCGCACAC CCTCGACCTG
TGGATCCACC CGCCCGACCT CGACGCCCCC GCGCCCTGGG CCGCCCACGA CGGCGGCCAG
GTGTGGCGGC TGCCGGCCCA CGAGGGCCGG ATGCTCGACG AGCAGGCGCT CGCCGGCGCG
CCCGCGCCGT ACCCGGGCCT GGTCTCGCTG GGGTCCAACG GTGAGGGCCG GGTGCTCGTC
GACCTGGAGG CGGCCCACGG GCTGATCAGC CTCAAGGGCC CCCAGAGCAC CGCCGCCCTC
GCCGCGCTCG CGGTGGAGCT GGCCACCAAC CGCTGGTCGG ACCGGATGCT CGTCACGCTC
GTCGGTTTCG GGGAGGAGCT CGCCGTGATC GCCCCCGACC GCATCCGCTG CGTGGGCGGC
CTCGCCGAGA TCCTGCCCGA GCTGGAGGCC ACGGCCGAGG AGCGCGGCGC CGGCGGCGAG
GTGCTCACCG GCCGGATCCA CGGCCGCGCC GCCGACCCGA TCTGGCCGCC GCACTACGTG
CTGTCCGCGG TGGTCCCGAG CGCGGAGGAG GGCCGCCGTC TGGCGGTGCT CGCCAGGAAG
GGCGTCCGTA CGGCCGCCGG CTACGTCGTG GCGGGTGACG TCCCGCACGC CACCTGGAAC
TGGGAGATCA CCGAGGACGG CCGGGCCACG GTGGACGCGC TCGGGTTCGA GGTGGCCGCG
CAGCTCCTGC CCCGCCGCCA CTACCGGGCC CTGATCGACC TGTTCCACAC GGCCGGGCGG
CTCGACGGGG AGCTTCTGCC CGACGAGCGG GAGCCGGTCC CGCAGACGCC CTCGATCGAG
GTGCGGGTCC TCGGCCCGGT CGAGATCACC GGCCCGCCGC CGATGGAGGA GGGCCGGGCC
GTGCTCGCCG TCGAGCTCGT CGTCTACCTG GCGACCCACC CGGGAGGCGT CCACCCGGTC
GTGCTCGGCG GAATCCTCTG GCCGAGGGGC GTGCAGTCGG TGGTCCGGGA CGCCACGATC
GCCCGGGTCG TCGACTGGCT GGGCGTCGAC AGCGCCGGGC GGCCCAACCT CTACGCCGAC
GAGTCGGGGC GGCTCCGTCT CGGGCCCGAG GTGCGGACCG ACTGGATGCT CTTCCGCGAG
TTCGTCCGCC GGTCGCACGC GGACCCCGCC GTGCGCACCG TACTCCTGGA GAGGGCCCTG
AACCTGGTGC GCGGCCCGCT GTTGAACGGA CGTCCGCGCG GCCGGTACTC CTGGCTGGCC
GCCGACGACC TGGAGTACGA CGTGACCGCC GGTGTCGCGG ACGCCGCCCA CCGGCTCTGC
GAGATGCGGC TGGCGAACGG CGAGGCCGCC CAGGCCGTCG CGGCGGCGCG GGCCGGGCTG
CTGCTGGCCG CCGACGACGA GGCGCTCTGG CGGGACCTGC TGCGGGCCAC CCATCTGACC
GGGGACCCGG GCCGCCTGCG AGCCGTGGCC GACGCCCTGA ACCGGCGGGC CGGCTCCCAC
CCCGACGGCG GCGGGATGGC GCCGGAGACG GAGGCGCTCA TCGACGAGCT GCTGCCCTCG
TGGCGGATGC GTTCGGCGCC GTCGGCATGA
 
Protein sequence
MPTRQPMRIR PRRTAGDLFA GLGALVVLAA LLGGVPYALL RLAGPPLPPE LLDIDLLTSP 
VGTGTIVAIL VLLVWLAWLQ LTVCVIVEVY AGLRRVGMPA RVPLSGGTQV LANRLVSAVL
VLFTMSAVVV PIAKAGGTPA AGPAVASVAL SAPVAEERAP LVPVEKAKKV YVVQPPHGRH
HESLWEIAEK CLGDGRRYPE IYRLNQHKEQ PDGSRLHMAD LIRPGWVLDM PADARNIHLV
PAAQPRDATL KEHPDRPAEL DGRTRTFTPG RADLPVESRP EVSRPSDTSV VPGDGRTGPA
ETRRAPSDTS RRSPQETATA REPRAADDSG RTGRQTSEGG TGRDPSVAAD PGGRAGQAGQ
DSGLEMLDYL AVASLAAAGL LAALGRRRRR QLWYRAFGHR IARPRGDAAQ AELALRLGAD
APGSRMLDIG LRLLGRSLAA RDRVPPTIYA AHLSPHTLDL WIHPPDLDAP APWAAHDGGQ
VWRLPAHEGR MLDEQALAGA PAPYPGLVSL GSNGEGRVLV DLEAAHGLIS LKGPQSTAAL
AALAVELATN RWSDRMLVTL VGFGEELAVI APDRIRCVGG LAEILPELEA TAEERGAGGE
VLTGRIHGRA ADPIWPPHYV LSAVVPSAEE GRRLAVLARK GVRTAAGYVV AGDVPHATWN
WEITEDGRAT VDALGFEVAA QLLPRRHYRA LIDLFHTAGR LDGELLPDER EPVPQTPSIE
VRVLGPVEIT GPPPMEEGRA VLAVELVVYL ATHPGGVHPV VLGGILWPRG VQSVVRDATI
ARVVDWLGVD SAGRPNLYAD ESGRLRLGPE VRTDWMLFRE FVRRSHADPA VRTVLLERAL
NLVRGPLLNG RPRGRYSWLA ADDLEYDVTA GVADAAHRLC EMRLANGEAA QAVAAARAGL
LLAADDEALW RDLLRATHLT GDPGRLRAVA DALNRRAGSH PDGGGMAPET EALIDELLPS
WRMRSAPSA