Gene Sros_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1300 
Symbol 
ID8664575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1344332 
End bp1345054 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort chain dehydrogenase protein 
Protein accessionYP_003337041 
Protein GI271962845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.607229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGA TTGTGGTGAC GGGCGGGGGC ACCGGGATCG GGGCCGCCGT CGCGGCGGCG 
TTCGCCGCTC ACGGGGACCG GGTTACCATC ACCGGGCGGC GGGAGCAGGT GCTCAAGGAG
ACCGCCGACA GGCTGGGCGT GTCCCACGTG GCGTTCAACG CGGCCAACCC GGTCGCGGTG
GGCGAGGCCC TGGAGCGGCT GCCGGACCGG GTGGACGTGC TGGTCAACAA CGCGGGCGGC
AACACCAACC TGGACCGCGC ACCGGACGGC GACGACCTGA TGGACGTGGC CGAGAGCTGG
TGGGCCAACC TCAACGCCAA CCTGATGTCG GCCGTGCTGG TCACGAGCGC GCTGACCCCC
CGGCTGGCCG ACGGCGGCCG GATCGTCACG ATCGGCTCGA TCGCGGCCCG GGGCACCGGC
TCCGGCTCGT ACGGCGCCGC CAAGGCCGCG GTGGAGGCGT GGACCGCCGA CCTGGCCGCC
GAGCTCGGCC CGCGCGGCGT CACCGCCAAC GTGGTCTCCC CCGGACTGGT CGTGGACACC
GAGTTCTTCC GCGGCCGCCT CACCGAGGAG GGGGTGCGGC GCCGGGTGGA GAGCACCAGG
AACGGGCGTC CCGGCACGCC CGACGACGTC GCGGCCACGG TGAGGTTCCT CGCCTCCCCC
GAGGCCCGGC ACATCACCGG TCAGGTCGTC CATGTGAACG GCGGCGCGTA CCTCGGCAGG
TAG
 
Protein sequence
MREIVVTGGG TGIGAAVAAA FAAHGDRVTI TGRREQVLKE TADRLGVSHV AFNAANPVAV 
GEALERLPDR VDVLVNNAGG NTNLDRAPDG DDLMDVAESW WANLNANLMS AVLVTSALTP
RLADGGRIVT IGSIAARGTG SGSYGAAKAA VEAWTADLAA ELGPRGVTAN VVSPGLVVDT
EFFRGRLTEE GVRRRVESTR NGRPGTPDDV AATVRFLASP EARHITGQVV HVNGGAYLGR