Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1300 |
Symbol | |
ID | 8664575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1344332 |
End bp | 1345054 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short chain dehydrogenase protein |
Protein accession | YP_003337041 |
Protein GI | 271962845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.607229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAGA TTGTGGTGAC GGGCGGGGGC ACCGGGATCG GGGCCGCCGT CGCGGCGGCG TTCGCCGCTC ACGGGGACCG GGTTACCATC ACCGGGCGGC GGGAGCAGGT GCTCAAGGAG ACCGCCGACA GGCTGGGCGT GTCCCACGTG GCGTTCAACG CGGCCAACCC GGTCGCGGTG GGCGAGGCCC TGGAGCGGCT GCCGGACCGG GTGGACGTGC TGGTCAACAA CGCGGGCGGC AACACCAACC TGGACCGCGC ACCGGACGGC GACGACCTGA TGGACGTGGC CGAGAGCTGG TGGGCCAACC TCAACGCCAA CCTGATGTCG GCCGTGCTGG TCACGAGCGC GCTGACCCCC CGGCTGGCCG ACGGCGGCCG GATCGTCACG ATCGGCTCGA TCGCGGCCCG GGGCACCGGC TCCGGCTCGT ACGGCGCCGC CAAGGCCGCG GTGGAGGCGT GGACCGCCGA CCTGGCCGCC GAGCTCGGCC CGCGCGGCGT CACCGCCAAC GTGGTCTCCC CCGGACTGGT CGTGGACACC GAGTTCTTCC GCGGCCGCCT CACCGAGGAG GGGGTGCGGC GCCGGGTGGA GAGCACCAGG AACGGGCGTC CCGGCACGCC CGACGACGTC GCGGCCACGG TGAGGTTCCT CGCCTCCCCC GAGGCCCGGC ACATCACCGG TCAGGTCGTC CATGTGAACG GCGGCGCGTA CCTCGGCAGG TAG
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Protein sequence | MREIVVTGGG TGIGAAVAAA FAAHGDRVTI TGRREQVLKE TADRLGVSHV AFNAANPVAV GEALERLPDR VDVLVNNAGG NTNLDRAPDG DDLMDVAESW WANLNANLMS AVLVTSALTP RLADGGRIVT IGSIAARGTG SGSYGAAKAA VEAWTADLAA ELGPRGVTAN VVSPGLVVDT EFFRGRLTEE GVRRRVESTR NGRPGTPDDV AATVRFLASP EARHITGQVV HVNGGAYLGR
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