Gene Sros_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1285 
Symbol 
ID8664560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1323202 
End bp1324596 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content72% 
IMG OID 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003337026 
Protein GI271962830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.527879 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGGA TCGTGATCAT CGGTGGCGGG CCCGGCGGCT ACGAGGCGGC GCTGGTGGCC 
GCGCAACTCG GGGCGCAGGT CACCGTGGTC GAACAGGACG GTCCCGGCGG GGCCTGCGTG
CTGACGGACT GCGTGCCGTC CAAGACGCTG ATCGCCACCT CCGTGCGCAA GCAGGCGCTG
CTCGACGCCA GCATGCTGGG CGTGCACTAC ACCGGCGGTC CCGACGGCGA CGCCGGTGGC
GTCATCGCCG ACATGCCGCT GGTCAACAAG CGGGTGAAGG AGCTGGCCCA GGCGCAGTCC
GCCGACATCG CCGTGCGGCT GGCGGCCGAG GGGGTCGAGG TGGTCCGGGC AGCCGGGCGG
CTGGTCGACC CGCAGGTGGT CAGGGCCGGT GACCGGACGA TCCGCGCCGA CGTCGTCATC
GTGGCGACCG GCGCGACCCC GCGCATCCTG CCCAGCGCCG AGCCGGACGG CGAGCGCATC
CTCACCTGGC GCCAGATCTA CGACCTGGAG GAGCTGCCCG AGCACCTCAT CGTGGTGGGC
TCCGGCGTCA CCGGCGCGGA GTTCGCGGGC GCCTACCGCT CCCTGGGTTC CGAGGTCACG
CTCGTGTCCT CGCGCGACCG GATGATGCCC AACGAGGACG CCGACGCCGC CGAGGTCCTC
GAAGAGGTCT ACCGGCGCCG CGGGATGAAC GTCATGGGCC GTTCCCGGGC CGAGTCCGTC
AAGCGCACCG CCGACGGCGT GGTCGTCACG CTGGAGGACG GCAGGACCGC CGAGGGCAGC
CACTGCCTGA TGACGGTCGG CATGATCCCC AACACCGCCG GGCTCGGCCT GGAGGAGGCC
GGGGTCACCC TCGACCGGGG CGGCTTCATC CAGGTGGACA AGGTCTCCCG CACCTCCGCG
CCCGGCGTCT ACGCGGCCGG CGACTGCACC GGCGTGCTGA TGCTGGCCTC GGTCGCCGCC
ATGCAGGGCC GGATCGCGGT CTGGCACGCG CTCGGCGAGG CCGTCCAGCC GCTCCGCCTG
GCCACCGTCG CCTCCAACAT CTTCACCGAC CCCGAGATCG CCGCCGTGGG CGTCGCGCAG
AAGGCGATCG AGGCCGGTGA GATCGAGGCC AACGTGGTCA AGCTGCCGCT GGCCACCAAC
GCCCGCGCCA AGATGCAGGG CTTCAACGAC GGCTTCGTGA AGCTGTTCTG CCGCCCGCAC
ACCGGCATCA TCCTCGGCGG CGTCGTGGTG GCCCCCCGGG CGTCCGAGCT GATCCTGGCG
GTCTCGGTGG CCGTCCAGCA GCGGCTCACG GTGGACCAGC TCGCCCACAC CTTCGCGGTC
TACCCCTCGA TGTCCGGCTC CATCACCGAG GCGGCCCGCC GTCTGATGCA GCCGATGACC
CCCAGCGGGA TCTGA
 
Protein sequence
MTRIVIIGGG PGGYEAALVA AQLGAQVTVV EQDGPGGACV LTDCVPSKTL IATSVRKQAL 
LDASMLGVHY TGGPDGDAGG VIADMPLVNK RVKELAQAQS ADIAVRLAAE GVEVVRAAGR
LVDPQVVRAG DRTIRADVVI VATGATPRIL PSAEPDGERI LTWRQIYDLE ELPEHLIVVG
SGVTGAEFAG AYRSLGSEVT LVSSRDRMMP NEDADAAEVL EEVYRRRGMN VMGRSRAESV
KRTADGVVVT LEDGRTAEGS HCLMTVGMIP NTAGLGLEEA GVTLDRGGFI QVDKVSRTSA
PGVYAAGDCT GVLMLASVAA MQGRIAVWHA LGEAVQPLRL ATVASNIFTD PEIAAVGVAQ
KAIEAGEIEA NVVKLPLATN ARAKMQGFND GFVKLFCRPH TGIILGGVVV APRASELILA
VSVAVQQRLT VDQLAHTFAV YPSMSGSITE AARRLMQPMT PSGI