Gene Sros_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1271 
Symbol 
ID8664546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1308321 
End bp1309472 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID 
Productsugar ABC transporter, permease protein 
Protein accessionYP_003337012 
Protein GI271962816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.745875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCG CGGAGTCGAG CTTCGCCGAC CGGCTGCTCG GCCGGGTCCG GCTCGGCGGC 
CTGCTCTCGC TCGCCGCGCC GCTCCTCGCC ATCGTGTTCG CCGGGCTGGT CACCTCGATC
GTCCTGCTGG TCACGGGTGA CCCGCCCCTG GAGACGCTGG GCACCATGGT CGACTACGGC
GTGCAGCCGC GCTCGATCGT GTTGACCCTG AACTCCGCGA CGACCTACTA CCTGTCCGCG
CTGGCGGTGG CGATCGGGTT CCGGATGAAC CTGTTCAACA TCGGCGTCGA CGGCCAGTAC
CGCCTGGCGG CGCTCGTCGC GGCGGCCGTG GGCGGTGCGG TCGTCCTGCC CGCCCCGCTG
CACATCGCCC TCGTCATCTT CGTCGCCATG GTGGTCGGCG CGGGATGGGC GTCCATCGCG
GGCCTGCTCA GGGTCAAGCG CGGCGTCAGC GAGGTCATCT CCACGATCAT GCTGAACGCC
ATCGCCACCG CACTCGGTGC CTGGCTGCTC CACAAGGATC GTTTCGCGGT CGAGGTCTCG
GGCAGCAACA ACATCGGCAC CAAGCCGATC GCCGAGTCCG GCAGGGTGCC CGGCATGGCG
ATCATCCCCG GCACCGAAGC CAAGGTGTTC GGTCTCATCG TCCTGGCGAT CGTCATGGGG
ATCCTGTACT ACGTGCTGCT CAACCGGACC CGCTTCGGCT TCGAGCTGCG CGCCACCGGC
CGCTCCGAGT CGGCCGCGGT GGCCAGCGGT GTCAACGTCA AGAAGATGAT CCTCCTCGCG
ATGATCCTGT CCGGCGCGAT GGCGGGCCTG GTCGGCATGC CCCAGTTGCT CGGCGCCTCC
TACAGCTACA GCCTGGACTT CCCCACGGGG CTGGGCTTCA CCGGCATCGC GATCGCGCTG
CTCGGCCGTA ACCATCCCGT CGGCATCGCC TTCGGCGCCC TGCTGTGGGC CTTCCTCGAC
ACCTCGTCGG GCATCCTGCA GCTGCACGAG ATCTCCCCGG AGATCGTCAT CATCATGCAG
GGCACGATCG TGCTCTCGGT CATCATCGCC TACGAACTGG TTCACCGTTA CCGCGTCGCA
GCCGGGCAAC GCCGGGCGAG CAAGGAACTG GCGAGCGGGA CCCCGGCCCA GGCTGAAGGA
GCGTCAGCAT GA
 
Protein sequence
MSPAESSFAD RLLGRVRLGG LLSLAAPLLA IVFAGLVTSI VLLVTGDPPL ETLGTMVDYG 
VQPRSIVLTL NSATTYYLSA LAVAIGFRMN LFNIGVDGQY RLAALVAAAV GGAVVLPAPL
HIALVIFVAM VVGAGWASIA GLLRVKRGVS EVISTIMLNA IATALGAWLL HKDRFAVEVS
GSNNIGTKPI AESGRVPGMA IIPGTEAKVF GLIVLAIVMG ILYYVLLNRT RFGFELRATG
RSESAAVASG VNVKKMILLA MILSGAMAGL VGMPQLLGAS YSYSLDFPTG LGFTGIAIAL
LGRNHPVGIA FGALLWAFLD TSSGILQLHE ISPEIVIIMQ GTIVLSVIIA YELVHRYRVA
AGQRRASKEL ASGTPAQAEG ASA