Gene Sros_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1225 
Symbol 
ID8664500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1255925 
End bp1256500 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content76% 
IMG OID 
ProductConserved protein containing a Zn-ribbon-like protein motif possibly RNA-binding 
Protein accessionYP_003336966 
Protein GI271962770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00786893 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGGTCC TGGAGTTCGT CAGTACGATC CGCGCGACAC GGAGCGGGCT GCTGGACACG 
CTCTCGGACG TCGAGGGCAT GACCGAGTGG GGCCGGGCCC ACGCCGCCGG GCTGGGGCTC
ACCGCCGGCT TCACCGCCAC CGAGGACCTG CGGCGCGAGG TGGTGGAGCT GCGGCAGGCC
GTCCGGGCCC TGTTCGCCAG GGCCGTCGCG CCGGGCCCGG TGAGCAGCGC GGACGCCGAC
CGGCTACCGG ACTTCGCCGA GTCGCTCGAC CTGGTCAACG CCGCGGCGCT CGCCGCGCCG
CTGGCCCCCC GGCTGGACTG GCCGGCCGAG GGCGCCCCGG TGGCCACGAG CGTCCCGGCG
GGCGAGAGGG CGGAGTCCCC GCGCATCCGC GCCGCCCTCG CCACGTCGGT GATAGAGCTG
CTGGCCGGAC CGGCCCGCGA GCAGCTGCGC GCGTGCCCGG CCCCCCGCTG CGTGCTCTAT
TTCGTCAAGG AGCACGCCCG CCAGGAGTGG TGCTCGATCG GGTGCGGCAA CCGGGCCCGC
GCCGCCCGCC ACTACCGCCA GCACAAGGGC CGGTGA
 
Protein sequence
MLVLEFVSTI RATRSGLLDT LSDVEGMTEW GRAHAAGLGL TAGFTATEDL RREVVELRQA 
VRALFARAVA PGPVSSADAD RLPDFAESLD LVNAAALAAP LAPRLDWPAE GAPVATSVPA
GERAESPRIR AALATSVIEL LAGPAREQLR ACPAPRCVLY FVKEHARQEW CSIGCGNRAR
AARHYRQHKG R