Gene Sros_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1086 
Symbol 
ID8664361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1113155 
End bp1113808 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID 
ProductLSU ribosomal protein L3P 
Protein accessionYP_003336828 
Protein GI271962632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.10406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGC AGATCAAGGG CGTCCTGGGC AAGAAGCTCG GCATGACCCA GGTCTTCGAC 
GCGGACAACC GGATGGTCCC GGTGACCGTC GTCGAGGCTG GTCCGTGCGT CGTGACCCGC
GTCCGCACCC CCGAGAAGGA CGGCTACTCC GCCGTGCAGC TCGGCTTCGG GCAGGTCGAC
CCGCGGAAGG TCAACAAGCC GCTCGGCGAC TACCTGCGCA AGCACGACAT CACCCCGCGC
CGCTACTTCG CGGAGATCCG TACCGAGGAC GCGGGCGACT ACACCCTGGG CCAGGAGCTC
TCCGCCGACA CCTTCGAGGC CGGCCAGTTC GTCGACGTGA CGGGCAAGAG CAAGGGCAAG
GGTTTCGCCG GTGTCATGAA GCGCCACGGC TTCAAGGGCC TCAGCGCCTC GCACGGTACC
CAGCGCAAGC ACCGCTCGCC GGGTTCCATC GGTGGCTGCG CCACCCCGGG CCGCGTCTTC
AAGGGCCTGC GCATGGCCGG TCGGATGGGT AACGTCCGCA CCACCGTCCA GAGCCTCAAG
GTCCACGCCG TGGACGCCGA GAAGGGCCTC ATCCTGATCA AGGGTGCGAT CCCCGGCGCC
AACGGCAGCC TGGTTCTCGT CCGTACCGCT GCCAAGAAGG GGGCTGCCAA GTGA
 
Protein sequence
MAKQIKGVLG KKLGMTQVFD ADNRMVPVTV VEAGPCVVTR VRTPEKDGYS AVQLGFGQVD 
PRKVNKPLGD YLRKHDITPR RYFAEIRTED AGDYTLGQEL SADTFEAGQF VDVTGKSKGK
GFAGVMKRHG FKGLSASHGT QRKHRSPGSI GGCATPGRVF KGLRMAGRMG NVRTTVQSLK
VHAVDAEKGL ILIKGAIPGA NGSLVLVRTA AKKGAAK