Gene Sros_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1002 
Symbol 
ID8664276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1017266 
End bp1018816 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content69% 
IMG OID 
Productpermease, MFS 
Protein accessionYP_003336746 
Protein GI271962550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGATCC CGTCCTGCCG CACTGTCGAC ACCATGTCTC GACAGCACGC GCACAACTCA 
CCGGGCCTGC GGGCCTGGCT CGGCCTTCTG GTGATCCTCG GGCCCGTACT ACTGGTCTCC
ATGGACGGGT CGATCCTGTT CCTGGCGATG TCCCGGGTCA GCCAGGCCCT CACGCCGACC
GCCGACCAGG CCCTGTGGAT TTTGGACATC TACGGCTTCG CCGTCGGCTC CCTGCTGATC
GCGTTCGGCA ACATCGGCGA CCGGTACGGC CGGCTGAAGT TGCTCATGAT CGGCACGGCG
GCCTTCGGCA TCGGCTCCGC GGGAGCGGCG TTCGCGCCGA CCCCCGAGCT TCTGATCGTC
GCCCGCGCGC TGATGGGAGT GGCGGGTGCG ACTCTCCTGC CATCGGCCCT GGCCGTGTTG
AGCGAGCTGT TCACCGACCC GCGGCGACGG GCGCAGGCCA TCGGCATCTT CGCCGCGGCG
TTCGCGGCCG GGTTCGCCAT CGGCCCGGTC GCCGGCGGCA TCCTGCTGGA ACGGTTCTGG
TGGGGCTCGG TCTTCCTGGT CAACCTTCCC GTCATCGCCC TGTTCCTGTT CTTCGCGCCG
GTCCTGCTCC GTGAGGTCCG TGCGACCCGC CCGGGTCACG TCGACGCGCT CAGTGTCGTG
ACCTCCGCGG CCGGCCTCCT GCTCACGATC TACGGCCTCA AGCACTCCGC CGCCGAGGGG
CTGTCGACCG TCCCGGTTCT CGTGGGGATC GCAGGGCTGG TCCTGCTGGC GTGGTTCGTC
CGCAGGCAGC GGAGCCTCCG ACATCCGTTG ATCGAGTTCT CGCTCTTCCG CGACCGTGTC
TTCACGGTGG CGATCATCAC CGGTCTGCTG CCGTTGGCGG CGTGGTCGGC GGCCGCGTAC
CTGGCAGGCA TCTACCTCCA ATCCGTCCTT GACCTGCCTG TCCTGCGGGC GGCTCTCCTA
GCGCTTCCCG GCGCTGTGGT TCTCACCATC ACCTGCGTCG TCACGCCTTT CGTGGTCGAC
CGCATCGGAA AGCGGACCGC CCTCGTCATC TGCCACTTCT CCATCGCGGC GGGTCTGCTG
TTGCTGCTCC CCACGACGAT CACGGGCGGG ATCGGCTGGT ACGTCGCTTC CACGATCATC
GCGGGCGTCG GCTACGGCAT CTGCTTCAGC GTCGTCGCCG ACACCGCCGT CGGCGCGGTC
CCCGCGGAAC GGGCAGGCTC GGCGGGTGCG ATCGCGGAGA CCGGCAACGA GATCGGCAAC
GCCCTCGGCA TCGCGCTCCT CGGCTCACTC GCCGCCCTGG TCTTCCGGCT CCAGGGACCC
GACCTGGCAC CCACCCTGGA CGAGACCCTC CAGCTTCCGG ACCTCGCGCC CGCGGTGGCC
GCGGAGGCGA GGACGGCCTT CGTCACCGGC CTGCACGTGG CCGCCGCAGT GGCCGCCGTC
CTCCACACGG CACTCGGCGT CCTCGCCCTT CGCTGGCTCC CCGGATCAGT GACAACACAG
GCCGGCTCTG ATATCCGATC CGGGGACACG ACAGATCGAG CAGAAGTATG A
 
Protein sequence
MPIPSCRTVD TMSRQHAHNS PGLRAWLGLL VILGPVLLVS MDGSILFLAM SRVSQALTPT 
ADQALWILDI YGFAVGSLLI AFGNIGDRYG RLKLLMIGTA AFGIGSAGAA FAPTPELLIV
ARALMGVAGA TLLPSALAVL SELFTDPRRR AQAIGIFAAA FAAGFAIGPV AGGILLERFW
WGSVFLVNLP VIALFLFFAP VLLREVRATR PGHVDALSVV TSAAGLLLTI YGLKHSAAEG
LSTVPVLVGI AGLVLLAWFV RRQRSLRHPL IEFSLFRDRV FTVAIITGLL PLAAWSAAAY
LAGIYLQSVL DLPVLRAALL ALPGAVVLTI TCVVTPFVVD RIGKRTALVI CHFSIAAGLL
LLLPTTITGG IGWYVASTII AGVGYGICFS VVADTAVGAV PAERAGSAGA IAETGNEIGN
ALGIALLGSL AALVFRLQGP DLAPTLDETL QLPDLAPAVA AEARTAFVTG LHVAAAVAAV
LHTALGVLAL RWLPGSVTTQ AGSDIRSGDT TDRAEV