Gene Sros_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0481 
Symbol 
ID8663750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp482872 
End bp483576 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content74% 
IMG OID 
ProductFlp pilus assembly protein TadB-like protein 
Protein accessionYP_003336250 
Protein GI271962054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGC TGGCCGTGCT TTTCGCCGCC CTGGCTGTGT GGCTGTGGAC CGGGCCCGCT 
CCGGGGACGG CCCGCCTGTG CCGGATAGAG CATCGCCCCC GGAGCGGGCC GGGTTCCCTG
TACGCGAGGT TCGCAGGCCG TTCGCGGCCC TCCAAACGTA CGGCTGCCTG GCGGATCGCA
TCGATCGAGC TGTGCCAGGG GCTCGCGGCC GAACTGGCCG CCGGGCGGAC CGCAGGGGAG
GCGCTGGCCC GCGCCGTGTC GACCGTGGAG TTTCCCGATC CGGTGGCGCT GCGGCCGTTG
ATCGCCGCGG CGAGGGACGG CGGAGACGTC CCCGCCGCGC TGCTGGCCGC GGCGCCAGAA
CAAGGAGGCG AGGCTTTCAG CAGGCTGGCC GCTTGCTGGA AGGTGAGCGT GACCGCCGGG
GCGGGCCTGT CCGTCCTCGT CGACCGCGTG GCCGGTTCCC TCAGAGAGGC TCAGGCCCAT
CGTCAGGACG TCGCCGCCCA GCTCGCAGGC CCTCGCGCCA CGGCCCGGCT GCTGGCAGGA
CTTCCCGCCC TCGGCCTGCT GATGGCCATG GGCCTGGGCA TGCGCCCGCT GCACTTCCTG
TTCGGCAGCC CGGCGGGCGT GGGCTGCCTG GCTCTCGGCC TCGTGCTCGA CGGCTGTGGT
CTGTGGTGGA CCCACCGCCT GGTCGCCCAC GCTCAGCAAG CCTGA
 
Protein sequence
MTALAVLFAA LAVWLWTGPA PGTARLCRIE HRPRSGPGSL YARFAGRSRP SKRTAAWRIA 
SIELCQGLAA ELAAGRTAGE ALARAVSTVE FPDPVALRPL IAAARDGGDV PAALLAAAPE
QGGEAFSRLA ACWKVSVTAG AGLSVLVDRV AGSLREAQAH RQDVAAQLAG PRATARLLAG
LPALGLLMAM GLGMRPLHFL FGSPAGVGCL ALGLVLDGCG LWWTHRLVAH AQQA