Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3978 |
Symbol | |
ID | 5081461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4626111 |
End bp | 4626623 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640501190 |
Product | hypothetical protein |
Protein accession | YP_001185480 |
Protein GI | 146295056 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTGGGG AATGCTTGGG ATATTCCTAT TTTTTAGTTT GGTCACCTTC TGGTGTCTTT ACAGCTATAG AGCCAATCAG AAATTGTCAG GCCAAGACAA ACCTCAAACC GAAGAGTTGG AGGGGAAACA TGAGTCAAAA TCTCAAAAAT GATTTAGTAA ATATAGTGTT GCTTGGTGTT TTGCTGCTGG GATTGATGCT AGCTCAAGAC TCTGGATGGG GATTCTTGCT CGCAGGTTTG CCATTGGTCA TTTGGTGCTT TAAAGCTTTC GCATTTATCC AACGCAGATG GTGGTTAGCC GTTCCTTTTT GGTGTGCGCT CACTTATTTG TGTTGGCAAA TGTCCTTGGC ACTTTGGGCT GGCTATCTAT TCGTTGCGTT TGTCAGAAAT ATGATGAAGT TAAATAAAAC CTACCCAATA CCAAGTCGTC ATAAACGAAT GAAACCAGAT AGTTCCGTTT TTATGGATAG TTTTGATTAC GACTATAGAA ACCATATTGG GTTTGATGAC TGA
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Protein sequence | MTGECLGYSY FLVWSPSGVF TAIEPIRNCQ AKTNLKPKSW RGNMSQNLKN DLVNIVLLGV LLLGLMLAQD SGWGFLLAGL PLVIWCFKAF AFIQRRWWLA VPFWCALTYL CWQMSLALWA GYLFVAFVRN MMKLNKTYPI PSRHKRMKPD SSVFMDSFDY DYRNHIGFDD
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