Gene Sputcn32_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3978 
Symbol 
ID5081461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4626111 
End bp4626623 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content41% 
IMG OID640501190 
Producthypothetical protein 
Protein accessionYP_001185480 
Protein GI146295056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTGGGG AATGCTTGGG ATATTCCTAT TTTTTAGTTT GGTCACCTTC TGGTGTCTTT 
ACAGCTATAG AGCCAATCAG AAATTGTCAG GCCAAGACAA ACCTCAAACC GAAGAGTTGG
AGGGGAAACA TGAGTCAAAA TCTCAAAAAT GATTTAGTAA ATATAGTGTT GCTTGGTGTT
TTGCTGCTGG GATTGATGCT AGCTCAAGAC TCTGGATGGG GATTCTTGCT CGCAGGTTTG
CCATTGGTCA TTTGGTGCTT TAAAGCTTTC GCATTTATCC AACGCAGATG GTGGTTAGCC
GTTCCTTTTT GGTGTGCGCT CACTTATTTG TGTTGGCAAA TGTCCTTGGC ACTTTGGGCT
GGCTATCTAT TCGTTGCGTT TGTCAGAAAT ATGATGAAGT TAAATAAAAC CTACCCAATA
CCAAGTCGTC ATAAACGAAT GAAACCAGAT AGTTCCGTTT TTATGGATAG TTTTGATTAC
GACTATAGAA ACCATATTGG GTTTGATGAC TGA
 
Protein sequence
MTGECLGYSY FLVWSPSGVF TAIEPIRNCQ AKTNLKPKSW RGNMSQNLKN DLVNIVLLGV 
LLLGLMLAQD SGWGFLLAGL PLVIWCFKAF AFIQRRWWLA VPFWCALTYL CWQMSLALWA
GYLFVAFVRN MMKLNKTYPI PSRHKRMKPD SSVFMDSFDY DYRNHIGFDD