Gene Sputcn32_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3944 
Symbol 
ID5081427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4586776 
End bp4588293 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content47% 
IMG OID640501158 
Producttransposon Tn7 transposition protein TnsD 
Protein accessionYP_001185448 
Protein GI146295024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCTT ACTTCCCCAA GCCTTATCCG GACGAGCTGT TGTATAGCAT GCTCGCCAGA 
TGTAAGGTAC ATATGGGGAT AGATAGCCCA AAGCATTTGC TGGATCTGCT CTACCAAAAA
CGTACAGTCA TTGCTGTACC CGACTTACCC GCTCAACTGC AGTTATTGTG TAACAGTCTC
CAGCATTTAC AGCAGCTAAA CGCCAAACAA CTTCTTTACC AAAGAACCCT GTTCCCGCTG
TATGCCCCTT TTATTCCCGA AAGCCGTAAG CAACACCTGA CTGACTTGCT GGTCAATAGT
GACGGTTCTG CTGTGTATGT GGAGATAGGC ATGAGCGCTG GTACGGTAAA GTTGCCAGCG
TTTTTCCGAT ATTGTCCTTT GTGTATGAAT GAGCTACAGC AAGAGTATGG CGAGTTTGCC
TGGTTACGGC GTTGGCTGGT TCCCGGTTAT CAGGTGTGTC ATATCCACGG CTGCGAGCTT
TGTGATTCCA AGCTGCCGCT GAGATCTATC CATCGGCACG AATATTTGGC TGCATGCCCA
CAGTATTGTG AGGACTTCGC TGTAGACACA AATCACAGTT CTAAGCTGGC AACACTTTCT
TCCAATATTA TGGAGCTATT GTCCATAACC GAAAGCCAGA GCCCCACATA TCACCAATGG
ACTATGTTCT ATCGAGAACA GGCAGTTGAA GCCGGTATGC AAAATGGTAT GCAGGTGTCA
GGTACTGAGC TTCACAGCAA GTTCAGAAGC TACTGGCCGC ATTCAATTTT AGTATCACTG
AACCTGGTAC CAGTGGGCCC CAGCTCTTGG TTATTAGCCA TGTTTCGCAA GCATCGGAAG
TCTTTTAGTT ATCTGCAACA CATTTTGGTA TGGCAGGTTT TACGACCTGC AGTATCTATA
AGGGAAATTT TATCTGAAGT TCAATCATTC CCACTGGCTA GGGCTTTTTC TAAACCCGTT
AGAGCGAGTA ATGGTATTGA GAGTAGAGAT AGAAAACAGT GGTTGAAACT ATTAGATGCT
GGTCATAGCG CTAAGCAGGC AAGGACGCAA TGTGACAAGG CGCTATATGC CCGGTTATAC
AGAAATGATC GGGATTGGTT ACTGGCAACC AATAAGCAGT TCCAGATTAA GCGGGGTAAT
CATAGTAATA TAAACTGGCA TAGCCGGGAT ATACAGTACT TGAGGTTGCT GTATCTGCAA
CTGACGCAGC GTGACCTAGA CCTGAGCAGC CCAAGGCAAA GTCGGAACTG GTTGCTTAAG
CAATTACCTC ACAGCTCTAC TGTCGAAAAA CACCTGGATC AATTACCGCT TTGCCAGGAG
TTTCTTCGGC GTTACAGCGA GAACGTAGAT GAGTACCAAA TTCGCCGCAT CACCGCGCAG
ATAGTAATTA ATAAGCAGCG ACATCAAATG CAAAGGCGCT GGGAATTAGA GCGTAGCTGT
GGTCTTGCCA ATGGGCGCAC AAGGCCATTA GCACTCGCAG TATTAAATGA CGTTGCTACC
AGGACCGATT TAAATTAA
 
Protein sequence
MLAYFPKPYP DELLYSMLAR CKVHMGIDSP KHLLDLLYQK RTVIAVPDLP AQLQLLCNSL 
QHLQQLNAKQ LLYQRTLFPL YAPFIPESRK QHLTDLLVNS DGSAVYVEIG MSAGTVKLPA
FFRYCPLCMN ELQQEYGEFA WLRRWLVPGY QVCHIHGCEL CDSKLPLRSI HRHEYLAACP
QYCEDFAVDT NHSSKLATLS SNIMELLSIT ESQSPTYHQW TMFYREQAVE AGMQNGMQVS
GTELHSKFRS YWPHSILVSL NLVPVGPSSW LLAMFRKHRK SFSYLQHILV WQVLRPAVSI
REILSEVQSF PLARAFSKPV RASNGIESRD RKQWLKLLDA GHSAKQARTQ CDKALYARLY
RNDRDWLLAT NKQFQIKRGN HSNINWHSRD IQYLRLLYLQ LTQRDLDLSS PRQSRNWLLK
QLPHSSTVEK HLDQLPLCQE FLRRYSENVD EYQIRRITAQ IVINKQRHQM QRRWELERSC
GLANGRTRPL ALAVLNDVAT RTDLN