Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3943 |
Symbol | |
ID | 5081376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4585157 |
End bp | 4586776 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640501157 |
Product | hypothetical protein |
Protein accession | YP_001185447 |
Protein GI | 146295023 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAGA AAACAATCAA AAAGATCCCC GTTAACGCAA AATTAGCCGC CCTTGGAAAT CAGTTCAGAA AAGAACGACC GGATGATTTC TGGCGCTTTG CCAGTTTTTT TACTTTGGAA AATGGTCAGG AGCACAAGGA AAATTTTGAT GTTGAAGCGC TTTGCGTTAT GGCTTTAGGC AGAACATTCA CACAAGACAA AGATGCGTTA TACAAATCTG GCGGATTTAG ACGAACCTTA AGTCTACCTC CAATTGAGTC TTGGCAAGAT GCCAAGCTGG GCGACTGCCC TCGTTTGGCT AAACGATGGT TATCTTACTC TGAAATAGCG AACCAACGGT GCTTTGTGTT TACCGCCAGC GGCATGACGG TGTGGTTGCC GAAATTTGAA TTAGCCAGGA AGCTATTCTT CCATGCTGGC TTCATTATTA GGGCTGCGTA TCAACCAAAT GGTTTGGATA TGATGTTTCA TTTAACCGAG GGTGAGCCCG GAGAAGGATT CCATATTTTT TGCCCCGCAG GTAGTGGCAT TCCGGTGGCG TATTTACGCA TTCCGGCATA CCGACAGTTT TTATCCTGGT TGTTGCTTAA CAAGGAAATA AAAGCATCTT TTGAGTCAAT ATGGCAGTGC TTGAACACTG AACAAACCAT CACCAACGGA TACTGCCGCT GGATATTTAA CTTTATTCCT CCTAAGGCGC TTTCGGGATT AGAAATTCAG GCTCAGGGAG CTTTCGACAG TGAGCATAAC GATCTTCTTG TCTGGGAAGT AAGTACCTTA AAAGAGCTGC CACATAACAT GCTCAAAGCA GTGAAATTCA GCCATCCTGA TTTAAGGCAA TCGGTTGGAT CTGGTAAAGC ACATCAGGGG AATGGTAATA ACTCAGCAGC CGAACAATTG GAGATAGATA CTGAGCGAGA GCCATCGCAG CAAAAAGAGC GAGCTTTAAT TGAACTGTCA ACCGACGGTT TAAGCTACAG CGACTTGATC ATCACTCAAA TTGAATACAA TCGCAAAAAG CCAATTTCTA AGCCAAAGCC GGGTGATGAA TCGGCGTCTG GTGCTGAGAA AGTCGTCCTG GGCACTAAAG ACGATGTAAT CGACGGAGAT GGCCGGGGTG GTGATTTCGC AGTATTAGAA GACACGCAGG ACGAAACCGA GAAATTTAAA GACCGCTTTA CAGTGTTAGT CGAGTTGATA TGGCAACTAG CAGATGATCC TGAATTACAG TTGCAAAGCC TGGTTATCAA ACCGCTACCA GCGGTTAAAC GCTGCCACTT GCACTTAAAA GCAGATGGTT CTGAGCGATG TTATCTACTA GCAAAGTTCG TTTATAAGGG GCGAATTAGG TATCTGCTCG AAGTTGATAC GTCAGATAAC AAGCGGAGGT TGACTACGAG AATATTTAGC ATAAGCCTTG GTGTGCGAGA GGCAGAGCTT ATTACGAGAA TACTGACGTC GCTTATTAAA AACTCATTGA GATGGCCAAT TTCAGCTTTC AAGACTCATG CAATAAGCCT CAGTTTGATA AGACATGCTC TATCCAATGA TCACATAGCA AGCTGGCGTT TAAGAATACT TGCCGGCATC AAAATTCCAA GACAAAAACA AAAAACGTAA
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Protein sequence | MQKKTIKKIP VNAKLAALGN QFRKERPDDF WRFASFFTLE NGQEHKENFD VEALCVMALG RTFTQDKDAL YKSGGFRRTL SLPPIESWQD AKLGDCPRLA KRWLSYSEIA NQRCFVFTAS GMTVWLPKFE LARKLFFHAG FIIRAAYQPN GLDMMFHLTE GEPGEGFHIF CPAGSGIPVA YLRIPAYRQF LSWLLLNKEI KASFESIWQC LNTEQTITNG YCRWIFNFIP PKALSGLEIQ AQGAFDSEHN DLLVWEVSTL KELPHNMLKA VKFSHPDLRQ SVGSGKAHQG NGNNSAAEQL EIDTEREPSQ QKERALIELS TDGLSYSDLI ITQIEYNRKK PISKPKPGDE SASGAEKVVL GTKDDVIDGD GRGGDFAVLE DTQDETEKFK DRFTVLVELI WQLADDPELQ LQSLVIKPLP AVKRCHLHLK ADGSERCYLL AKFVYKGRIR YLLEVDTSDN KRRLTTRIFS ISLGVREAEL ITRILTSLIK NSLRWPISAF KTHAISLSLI RHALSNDHIA SWRLRILAGI KIPRQKQKT
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