Gene Sputcn32_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3943 
Symbol 
ID5081376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4585157 
End bp4586776 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content44% 
IMG OID640501157 
Producthypothetical protein 
Protein accessionYP_001185447 
Protein GI146295023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGA AAACAATCAA AAAGATCCCC GTTAACGCAA AATTAGCCGC CCTTGGAAAT 
CAGTTCAGAA AAGAACGACC GGATGATTTC TGGCGCTTTG CCAGTTTTTT TACTTTGGAA
AATGGTCAGG AGCACAAGGA AAATTTTGAT GTTGAAGCGC TTTGCGTTAT GGCTTTAGGC
AGAACATTCA CACAAGACAA AGATGCGTTA TACAAATCTG GCGGATTTAG ACGAACCTTA
AGTCTACCTC CAATTGAGTC TTGGCAAGAT GCCAAGCTGG GCGACTGCCC TCGTTTGGCT
AAACGATGGT TATCTTACTC TGAAATAGCG AACCAACGGT GCTTTGTGTT TACCGCCAGC
GGCATGACGG TGTGGTTGCC GAAATTTGAA TTAGCCAGGA AGCTATTCTT CCATGCTGGC
TTCATTATTA GGGCTGCGTA TCAACCAAAT GGTTTGGATA TGATGTTTCA TTTAACCGAG
GGTGAGCCCG GAGAAGGATT CCATATTTTT TGCCCCGCAG GTAGTGGCAT TCCGGTGGCG
TATTTACGCA TTCCGGCATA CCGACAGTTT TTATCCTGGT TGTTGCTTAA CAAGGAAATA
AAAGCATCTT TTGAGTCAAT ATGGCAGTGC TTGAACACTG AACAAACCAT CACCAACGGA
TACTGCCGCT GGATATTTAA CTTTATTCCT CCTAAGGCGC TTTCGGGATT AGAAATTCAG
GCTCAGGGAG CTTTCGACAG TGAGCATAAC GATCTTCTTG TCTGGGAAGT AAGTACCTTA
AAAGAGCTGC CACATAACAT GCTCAAAGCA GTGAAATTCA GCCATCCTGA TTTAAGGCAA
TCGGTTGGAT CTGGTAAAGC ACATCAGGGG AATGGTAATA ACTCAGCAGC CGAACAATTG
GAGATAGATA CTGAGCGAGA GCCATCGCAG CAAAAAGAGC GAGCTTTAAT TGAACTGTCA
ACCGACGGTT TAAGCTACAG CGACTTGATC ATCACTCAAA TTGAATACAA TCGCAAAAAG
CCAATTTCTA AGCCAAAGCC GGGTGATGAA TCGGCGTCTG GTGCTGAGAA AGTCGTCCTG
GGCACTAAAG ACGATGTAAT CGACGGAGAT GGCCGGGGTG GTGATTTCGC AGTATTAGAA
GACACGCAGG ACGAAACCGA GAAATTTAAA GACCGCTTTA CAGTGTTAGT CGAGTTGATA
TGGCAACTAG CAGATGATCC TGAATTACAG TTGCAAAGCC TGGTTATCAA ACCGCTACCA
GCGGTTAAAC GCTGCCACTT GCACTTAAAA GCAGATGGTT CTGAGCGATG TTATCTACTA
GCAAAGTTCG TTTATAAGGG GCGAATTAGG TATCTGCTCG AAGTTGATAC GTCAGATAAC
AAGCGGAGGT TGACTACGAG AATATTTAGC ATAAGCCTTG GTGTGCGAGA GGCAGAGCTT
ATTACGAGAA TACTGACGTC GCTTATTAAA AACTCATTGA GATGGCCAAT TTCAGCTTTC
AAGACTCATG CAATAAGCCT CAGTTTGATA AGACATGCTC TATCCAATGA TCACATAGCA
AGCTGGCGTT TAAGAATACT TGCCGGCATC AAAATTCCAA GACAAAAACA AAAAACGTAA
 
Protein sequence
MQKKTIKKIP VNAKLAALGN QFRKERPDDF WRFASFFTLE NGQEHKENFD VEALCVMALG 
RTFTQDKDAL YKSGGFRRTL SLPPIESWQD AKLGDCPRLA KRWLSYSEIA NQRCFVFTAS
GMTVWLPKFE LARKLFFHAG FIIRAAYQPN GLDMMFHLTE GEPGEGFHIF CPAGSGIPVA
YLRIPAYRQF LSWLLLNKEI KASFESIWQC LNTEQTITNG YCRWIFNFIP PKALSGLEIQ
AQGAFDSEHN DLLVWEVSTL KELPHNMLKA VKFSHPDLRQ SVGSGKAHQG NGNNSAAEQL
EIDTEREPSQ QKERALIELS TDGLSYSDLI ITQIEYNRKK PISKPKPGDE SASGAEKVVL
GTKDDVIDGD GRGGDFAVLE DTQDETEKFK DRFTVLVELI WQLADDPELQ LQSLVIKPLP
AVKRCHLHLK ADGSERCYLL AKFVYKGRIR YLLEVDTSDN KRRLTTRIFS ISLGVREAEL
ITRILTSLIK NSLRWPISAF KTHAISLSLI RHALSNDHIA SWRLRILAGI KIPRQKQKT