6 homologs were found in PanDaTox collection
for query gene Sputcn32_3930 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_3930  transposition regulatory protein  100 
 
 
523 aa  1085    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3824  hypothetical protein  28.46 
 
 
532 aa  231  3e-59  Shewanella loihica PV-4  Bacteria  normal  hitchhiker  0.00389109 
 
 
-
 
NC_009052  Sbal_4356  hypothetical protein  29.14 
 
 
533 aa  210  5e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3943  hypothetical protein  23.92 
 
 
539 aa  97.4  5e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2921  transposition regulatory protein  29.05 
 
 
491 aa  65.5  0.000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_1205  Tn5468, orf5  22.17 
 
 
555 aa  43.5  0.01  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>