| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3878 |
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| Symbol | |
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| ID | 5081260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4502601 |
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| End bp | 4504031 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640501090 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001185383 |
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| Protein GI | 146294959 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0749813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAT TACTCGCAAT TGAGTCAAAA TGTCCAGAAG CGAACACTAT GAGCCAGATT
GATAATAACC TCAAGCCTCT CCCTCTAGCC GTATCAGTGC TTATCGTCGA CGATGAGCCT
GGAATGCGAA GTTTTTTAAA TAAAGCCCTT TCGAAGAAGT TCGCCTTAGT CGAAACCGCT
GGCAGTATTG AGGATGCGGA GCAATTACGT AGCCGCTGCC ATTTCGACTT GCTGATTGTC
GATATTCGTT TGCCGGGGCG CTCTGGTATT GAATGGCATG AGGCATTAGA TGAGCAGGGG
CGTCGCTCGG ATATTATCTT TATGACGGGC TATGCCGATA TGGAAGTGGC AATCACAGCG
CTGCGGGCGG GTGCTTCCGA TTTTATTATG AAGCCTTTTC ATCTTGATCA GATGATGGCG
GCTGTAGATC GTTGCATTGA GCGTCGTTTA CTCAAGCGTG AAAATCTGAT GCTGCGCCGT
GAGGTATCTA TTGGGTATTC ATCGACCATT ATTGGCAGTA GCGAGGCCAT GGAGTCAGTA
AAACATGTGA TAGAACGTGT GGCTCCAACT AATGCCGTTG TGCTTATACA AGGTGAATCA
GGTACGGGTA AAGAACTCGT CGCAAGACAA CTGCATTTAT TGAGTGGCCG ACAAGGGCCA
TTTGTTCCCG TCAACTGCGG CTCTATAGCC CCTGAGTTGC TCGAGAGTGA ACTCTTTGGC
CATGTTGCGG GTGCATTTAC GGGGGCGAAG GGAAATCGAG AGGGGTTATT TAGTTTCGCC
TCTGGTGGGA CGATTTTTCT GGATGAAATA GGTGAAATGC CACTGAAAAT GCAGACAGCG
TTGCTTAGAG TGTTAGAGCA AAAAGCGATC CGACCTGTCG GCAGTGAAAA AGAAGTGAAT
ATTGATGTTC GAGTGATTGC AGCAACAAAC CGAACACTCT TAGAGGAGGT TGACGCTGGG
AATTTCCGTC GAGATTTGTA TTATCGACTC AATGTGCTCG ACATCTTAAT TCCGCCATTA
AGGGATCGCC CTGAGGATAT CGTTGAGCTA ACCCATCACT TTACTCGTCA GCTTGCCGCT
GAGCTTGGTG TCAGGGAAGT AGTGTGGAGC CATGAGGATA TGGTTAAGCT ACAACAGCAT
GAATGGCCGG GTAATATCCG TGAGCTGCGT AATATGATCG AGCGTTGTAT TTTACTTGGT
AAACCCCCCG CGGAATATTG GAAACAACAG GTAAAGAGTG AATCTTCAGC TTCCCAAGGT
TATCCCTTAG ATTGGCCATT AAAGGATGTC GAAAAACATC ATGTCACCAG CGTGGTAGAT
TTACATTCTG GTAATAAATC TGCGGCAGCG AGAGACTTAG GTGTTTCTCG TAAAACCTTA
GATCGTAAAT ATAAAGAGTG GTTTGGCTTA AGCGACGAAC AGGAGTCTTA G
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| Protein sequence | MLELLAIESK CPEANTMSQI DNNLKPLPLA VSVLIVDDEP GMRSFLNKAL SKKFALVETA
GSIEDAEQLR SRCHFDLLIV DIRLPGRSGI EWHEALDEQG RRSDIIFMTG YADMEVAITA
LRAGASDFIM KPFHLDQMMA AVDRCIERRL LKRENLMLRR EVSIGYSSTI IGSSEAMESV
KHVIERVAPT NAVVLIQGES GTGKELVARQ LHLLSGRQGP FVPVNCGSIA PELLESELFG
HVAGAFTGAK GNREGLFSFA SGGTIFLDEI GEMPLKMQTA LLRVLEQKAI RPVGSEKEVN
IDVRVIAATN RTLLEEVDAG NFRRDLYYRL NVLDILIPPL RDRPEDIVEL THHFTRQLAA
ELGVREVVWS HEDMVKLQQH EWPGNIRELR NMIERCILLG KPPAEYWKQQ VKSESSASQG
YPLDWPLKDV EKHHVTSVVD LHSGNKSAAA RDLGVSRKTL DRKYKEWFGL SDEQES
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