| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3862 |
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| Symbol | |
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| ID | 5081244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4482327 |
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| End bp | 4483274 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640501074 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001185367 |
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| Protein GI | 146294943 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0367918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAC AAGACAGATT TATGTCACCA CAATGGAAAG CACGCTTCAA AGGGTATGTG
CAGGTGACTA AGCCTGGCAT CATTTTCGGG AATCTGATTT CCGTTGCTGG CGGTTTTTTA
TTAGCCGCCA AAGGCGACGT AAATTTGGTC TTGATGCTGG CGAGCTTAGT GGGATTGTCC
TTGGTTGTAG CCTCTGGCTG CGCTGTCAAT AACTGTATTG ACCGTGATAT CGACGCCAAG
ATGCAGCGAA CCAGCAAACG CGTAACCGTC ACGGGCGAAA TTGCCGTGGG TAACGTACTC
GCGTTTGGAC TCGCCTTAGG TGTGTTAGGC TTTAGCATCT TAGCCTTGTT TACCAATGCA
TTAGCCCTGC TATTTGCCGT TATTGGTTAC ATCGTTTATG TGGGGGTTTA TAGCCTCTAC
ATGAAACGTA ACTCAGTGTA TGGCACTTTA GTTGGCAGCT TCTCGGGCGC AGTACCGCCC
GTGGTTGGCT ATTGCAGTGT GACAGGGCAA ATGGACATGG GCGCAGCTAT TTTGCTGTTG
ATGTTCAGTC TATGGCAGAT ACCACATTCC TATGCCATCG CGATTTTCCG TTTTAATGAC
TATGCGGCCG CTAATATTCC TGTGCTACCG GTTGCAGAAG GCATGACCAA GGCAAAACTG
CATATCGTGC TGTATATTGC TGTGTTCGCC TTAGTCAGTG CGCTGTTGCC ACTCGCGGGT
TACACAGGTA TCGCCTTTAT GGCGGTCACC TGCGCAACCA GCCTGTGGTG GCTTGCCATG
GCATTAAAAG GTTATCGTCA CGACGTCGAT ATCCAACGCT GGGCTCGCCA AGTGTTTGGT
TTTTCAATTA TCACTATCAT GGCGCTTAGC ATAACCATGG CGCTGGATTC TCAAGTGATA
AAGGAGCAAG TCATAGGTCA AACAAGCCTA TTCACCTTAG TAAAGTAG
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| Protein sequence | MQTQDRFMSP QWKARFKGYV QVTKPGIIFG NLISVAGGFL LAAKGDVNLV LMLASLVGLS
LVVASGCAVN NCIDRDIDAK MQRTSKRVTV TGEIAVGNVL AFGLALGVLG FSILALFTNA
LALLFAVIGY IVYVGVYSLY MKRNSVYGTL VGSFSGAVPP VVGYCSVTGQ MDMGAAILLL
MFSLWQIPHS YAIAIFRFND YAAANIPVLP VAEGMTKAKL HIVLYIAVFA LVSALLPLAG
YTGIAFMAVT CATSLWWLAM ALKGYRHDVD IQRWARQVFG FSIITIMALS ITMALDSQVI
KEQVIGQTSL FTLVK
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