Gene Sputcn32_3840 details

Gene Information

• Locus tag: Sputcn32_3840
• ID: 5081174
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4453964
• End bp: 4456012
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640501052
• Product: hypothetical protein
• Protein accession: YP_001185345
• Protein GI: 146294921

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.542873
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAGT TAAAAATCGA GCAGCTTTCG ATTAGAACCA ACACGAATGA CGGCATCTAT 
GGTGTCGATA TTCCATTCAA AGATGGACTC AATATCATTC ATGCTGAGAA TACGCATGGT 
AAATCAACTT GTATTCAATC ATTAATCTTT GCTCTTGGTC TTGAGGGATG CTTAGGACCA 
TCAAGAAAAG TGCCGCTGAA AACGGCTTTG ACGACTCAAC TTCGAAAATC AAATGGCGCA 
ATGGCAACAA TATTTGAGTC GAAGATCTTT TTGCAGTTAA GCAACGGCAG AGAGAGGATT 
ACCGTCTTGA GAAGCAGTAT GTTTGAAAAA GCAAAGCTGG TTTCTGTTTA TCGCTCATCA 
ACGATCGAAC AAGTGCTGAA AGGGAGTAGT ATTTCTAAAG ACTACTTCCT TCGCGATGGA 
GGTTCTGCAA CAAGAGAAAG AGGTTTTCAC TGCTTCTTGG TTGATTTCAT GGGGGTAACT 
TTGCCCAAAG TCATGAAATT CGACGGCAGC GAAAGTTCTC TTTATTTGGA GTCTGCGTTC 
TCAATTAACT ATGTAGAACA AACTCGTGGT TGGGGGGGGA TATTGAACAT TCTCCCAACT 
TACCTTGGGA TTAAAGACCT CTCTGCTCGA ATTATCGAAC ATACACTTGA TCTTGACGTA 
CAAAAATACG TCAAAAAGAA GCAAGCTCTT AACCAAAAGA AGAGTGACGC TGAACGAATT 
TGGAATGTAG CTGTAGAAAA TCTGATATCT GTCGCTAAGA GTAGCAATGG TTTTATATCT 
AATGAGCTTG ATGATAAAAT AAGCAAGTCC ACATATGTTA GTAATACTAG TTATTTATAT 
GTACATAATG ACAGCGAGCA AAATTCCTAC AAGGATAGAA TCGAATACCT AAGGTCAGAG 
CTACAGCTTT TAAAAGCTGG AGCATCAAGC AGAAAGGTTG ATGAAAAGAA AGTTGTAATA 
CTTGATGAGC AGCTTCGCTA CCATACGGCA CTACTTGCCG AACAAGAAAA AGCTATTTCA 
TTCTTGATCT CTGACTTGAA CACATCAGAA AAGTACATGT TTTCAATTGA GGTTAGAATC 
AATGATGTAA AAGATAGCTT AAGGAAATAT AAAGACCTCG TTAAGCTTGA ATCGATAGGC 
TCGGAAGAAG AGTTTCAACT AGATCTGAAC AAGTGCCCTA CGTGTCATAC TGATATTGAA 
GATTCACTTC TTTTTCATGT TCAAAGTGAA CAAACCAAGT TTTTAGGTCT TAGTGATAAT 
ATTAAGTACC TAGAAAAGCA GAAAGAAGCA TTTGATGCGT TATTAGCTGG CGAAAAAAGA 
AACACCAACC TCAAACAAAT GAGACTCGCA GAAGCTAGAG TTAAACTTAG CGAAACTAGA 
CAACTCATAC GTGCGATAAA AGATAGTTTA GTTGATACGC AAGCTACACC ATCTCGAGTA 
GAAATTAAGC GAGAGCTTCT TATCGAAAGC GAGATAGAAA AGCTTGAGGC CGCACTTCAA 
AATGAGCTTA GAATCAAAGA TAAATTAACC GTTGCGTTAA TCGATTGGAA CACAGCTAAT 
TCAGCATTAG CTGCCATACC GTACTCAGGA TTGAGTCCCA ATGATAGGAA GAAGCTGGAG 
GCATTGAAGA ACAGTTTCAT CGGAAATCTT GATGAGTTCG GCTACAGTAG TAACTCTCTG 
AGCGATTTTC AAATTTCTCA AACCAGTTAT AAACCAACAT TAAATGATGT CGACATAAAT 
TCAGAAGCGT CTGCAAGTGA TAATATCCGT GTAATTTGGT CTTATTTGTA TTCAGTTCTA 
ACCCTAGACA TAACAACCTC ATTGCCTACT AATCATCTAG GTTTGTTAAT TATGGATGAA 
CCAAGACAGC AGGAAGCAAA ATATGAAAGC TTTAGTACGT TTATTTCTAA AGCAGCAAAT 
GTCAAGGAAA TGCAAAAACA AATCATTATA GGGACTAGTG AGAAGTACTC CGACTTACTT 
GATGCGATTA AGGATAAACC AGCCAATTTG ATGCACTTTG ACTCGGATAT AATCAAGAAA 
TTGAGCTAA 

 

Protein sequence

MSKLKIEQLS IRTNTNDGIY GVDIPFKDGL NIIHAENTHG KSTCIQSLIF ALGLEGCLGP 
SRKVPLKTAL TTQLRKSNGA MATIFESKIF LQLSNGRERI TVLRSSMFEK AKLVSVYRSS 
TIEQVLKGSS ISKDYFLRDG GSATRERGFH CFLVDFMGVT LPKVMKFDGS ESSLYLESAF 
SINYVEQTRG WGGILNILPT YLGIKDLSAR IIEHTLDLDV QKYVKKKQAL NQKKSDAERI 
WNVAVENLIS VAKSSNGFIS NELDDKISKS TYVSNTSYLY VHNDSEQNSY KDRIEYLRSE 
LQLLKAGASS RKVDEKKVVI LDEQLRYHTA LLAEQEKAIS FLISDLNTSE KYMFSIEVRI 
NDVKDSLRKY KDLVKLESIG SEEEFQLDLN KCPTCHTDIE DSLLFHVQSE QTKFLGLSDN 
IKYLEKQKEA FDALLAGEKR NTNLKQMRLA EARVKLSETR QLIRAIKDSL VDTQATPSRV 
EIKRELLIES EIEKLEAALQ NELRIKDKLT VALIDWNTAN SALAAIPYSG LSPNDRKKLE 
ALKNSFIGNL DEFGYSSNSL SDFQISQTSY KPTLNDVDIN SEASASDNIR VIWSYLYSVL 
TLDITTSLPT NHLGLLIMDE PRQQEAKYES FSTFISKAAN VKEMQKQIII GTSEKYSDLL 
DAIKDKPANL MHFDSDIIKK LS