Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3799 |
Symbol | |
ID | 5081133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4409705 |
End bp | 4410451 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640501012 |
Product | response regulator receiver protein |
Protein accession | YP_001185305 |
Protein GI | 146294881 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTA AACAGGCGCT ATCAAATGCC AATACGGCAT CTACGTTAAA AGAGGTTATT CAGGCAATAA CGGCAGCTTT GAAGCTGCAT GGTTTTAGTG GATTCTGGTT TCAAGGAGTC CCTCATTGCG CGTATGAAAA CTATCACTTT CCAAAAGAAA CCAATCTGTT CTCACAAGCT TCGCTGCGTA AACCTAATGC CAGCGTAGCT TCATCACCTG TAGTTGCTGA ACTGCAGCGT TTTTATCTAA GTCAGGTTGC CGCTAATGAT TTTAATTTTG GTTTTTCGCT AGATACTTCA AAATCTTATA TGTATCGCTT GTCGTGTGAT AAAGGTGATA AAGCTAGCCT ACTTTTTAGT AAGCATCATA TTCAAACCGT ATTAAGTTGG CCCGTTACAT GGCATAGCAA TCGACATTGG GTGGGTCGTT TTATATTGCT GAGTCATCTG AGTGATTCAG ACATCCTATT AACGGGTTTG AGTGCTACCT TAAAAGAGGC TCAAAACAAG CTGTTTGAAT GTAATAAGCA ATTATTTAAT CCATTTCTTC AAAGTTCTCT ACTTAAAGAT AATGCGAGAG ATATCTTACT TATGGTCGCA AACGGCCTGC AGAATGACGA AATTTCAACT CAGCTCCCGA TAAGTATCAG AGGAGTTGAA TACCATATGG AATCAATGCG TAGGAAGTTT GGGGCGACGA ATCGAGCAAA CTTAATTCAT CTCGCCCATC AATATGAGTT GATCTAA
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Protein sequence | MDAKQALSNA NTASTLKEVI QAITAALKLH GFSGFWFQGV PHCAYENYHF PKETNLFSQA SLRKPNASVA SSPVVAELQR FYLSQVAAND FNFGFSLDTS KSYMYRLSCD KGDKASLLFS KHHIQTVLSW PVTWHSNRHW VGRFILLSHL SDSDILLTGL SATLKEAQNK LFECNKQLFN PFLQSSLLKD NARDILLMVA NGLQNDEIST QLPISIRGVE YHMESMRRKF GATNRANLIH LAHQYELI
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