| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3712 |
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| Symbol | |
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| ID | 5079096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4319686 |
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| End bp | 4322205 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500919 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001185219 |
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| Protein GI | 146294795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.637834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTGGT TAAAACGTAT TGTTATAGCT CTATTTAGTC TAGCCCTTCT GGGTGTAGGC
GCCATTGTTG CAGCATACTT TTATGTTTTG CCGGATTTGC CGGATGTTTC GACACTAAAA
AATGTGCAAT TACAAACACC TTTGCGCATT TATAGCAGCG ACGGCAAACT CATTTCTCAG
TTTGGTGAAA AGCGTCGTAT TCCATTAAAG TTGGAAGAAG TCCCTAAGCC GCTGTTGCAA
GCCTTCCTTG CAACAGAGGA TGCACGTTTC TATGAACACG GCGGAATCGA TCCTGTTGGT
GTTATTCGTG CTGCGGTCGT CATGTTAACT ACAGGCGAAA AGAAACAAGG TGCAAGTACG
ATCACTATGC AGGTGGCGCG TAACTTCTTC TTAACCCGTG ACAAAACCAT TATTCGTAAA
GTGAAGGAGA TTTTTATTTC CTATCACATT GAGCAACTGC TAACCAAAGA TGAAATCCTC
GAACTCTATG TTAACCGCAT TTATTTAGGT CAAAGAGCCT ATGGTGTTGG CGCTGCAGCT
CAAGTGTATT TTGGTAAAAA CGTACAAGAT CTCAGCCTAT CCGAAATGAG TATGATTGCG
GGTTTACCTA AGGCTCCCTC AACACTTAAC CCTATTACGT CACATTCACG CGCATTGGCT
CGCCGCAATG TGGTGCTAAT GCGAATGAAT GAAGTCGGTT ACATCAATCA AACTGAGTAC
CAACTGGCTC TGCAAGAACC TTTAGTCGCT AAATACCATG GCGCTGAAAT TGATCTCTAT
GCGCCGTATA TTTCGGAAAT GGCGCGGGAT TATATGGTAC AAAAATATGG TGAAGAAGAG
GCCTATACCA ATGGGTATAA CGTCTACACC ACGATTTCAT CGGATCTGCA GTTACTCGCA
CAACAAGCTT TACGTAATAA TGTATACGCC TACGATGAAC GCCATGGTTA TAGAGGTGCC
GCAGCAGTGC TGTGGACAGG AACCAGGCCA GATAACACCC AAATTCAAGC TGAACTAGCT
AAGATCACGC CTGTACAGGA ATTACACCCT GCTGCGGTGT TAGGTCTTAA TGGTCAGCAA
GCAAGCGTAT TAACCGCCAA AGGTGAAACC AAAGTCATCA ACTGGGATGG ATTAAAGTGG
GCGCGCAAAT TCATTACCGA TAAACGTCAG GGTAGCGTTC CTAAAACGGC TGCTGATGTG
CTAAATGTGG GTGAACGTAT TTGGATCCGC GATAACGGTC AATATTTACA GTTGTCCCAA
GTACCAGAGG TTGCGAGTGC CACTGTATCA CTCGATCCAC AAAATGGCGC TATTCGTACC
TTGGTTGGTG GCTATAGCTT TAGCCAAAGT CAATATAACC GAGTGACCCA AGCAAAACGT
CAATTAGGCT CAAACATCAA ACCTTTCATT TATGCTGCTG CGTTAGAGAA AGGCTTTACC
TTAGCAACCT TAATCAACAA TGCACCAATT AATAAACCCG ATATCAGCCA AGGCACCGCA
TGGCGGCCTA AAAACTCGCC TGATATCTAT GGTGGCCCAA CTCGTTTACG TGTGGGTTTA
GCACAGTCGA TCAACGTAAT GTCAGTTCGT GCAATGCGCC ATATTGGTTT AGATGCTGCG
ATAGCTGAAC TGGTAAAATT TGGTTTTAAT CCAAACGATC TACCCCGCAA CGAATCTTTG
GCCTTAGGTT CTCCTTCGGT AACTCCACTA CAAGTTTCTA CTGCGTTTAA CGTATTTGCC
AATGGAGGCT ACTTAGTTGA ACCTTTCTAT ATTGACCGTG TAGAAGATTC TTTTGGCAAT
GTCATCGAGA AAGCGAATCC AACCTTAGCT TGCAAACCAA GCAACACAGC GGCCCCGCAG
TCAAATGACC CGATGAATTT TGGCAATGCA GATTTAGCAA CAGACGAACC TATTGCATAT
TGCTTTGGAC AAACAGGCCG TTATGCACCA CAAATTATTT CTGAACAGGT TGCATTTCTT
ATTACTGAAG CCCTGAAGAG TGTTATCTGG GGTGGCGGCG ATTGGAGTAA AGGCACTGGC
TGGCAAGGTA CGGCTTGGCG TGCTGCGCAG TTGATTAAAC GACACGATAT TGCAGGTAAA
ACAGGTACAA CTAACGAATC ACGTGATACT TGGTTCAGTG GTTTTAGCCC TGCACTTACC
AGCACTTTCT GGGTTGGATT TGATGATCAT GGTAGACAAT TAGGTAGAAC CGCTTGGAAT
GCCAATGGCG AAAAAGATCA AATCACGGGA GCAGAAGCTG GAGCAAAAAC CGCAGGGCCA
GGCTGGAACG AGTTTATGAA CGGTGTCTTA AAAGGTACAC CTGAAGCAAC TTTGATCCCA
CCTGAAGGTA TTGTCTCAGT ACGAATCGAT TTAGCGACAG GTAAACTCAC CCGAAAAACT
GACTATACCA GTGCGTTCGA GTACTTTATT TCGGGTACCG AACCGAAGGA ATACATCAGT
GAAACGCAAG ATGAAAATAG CCTCTTTATC GAATCACCAA CGGATGATTT ATTCCAATAG
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| Protein sequence | MKWLKRIVIA LFSLALLGVG AIVAAYFYVL PDLPDVSTLK NVQLQTPLRI YSSDGKLISQ
FGEKRRIPLK LEEVPKPLLQ AFLATEDARF YEHGGIDPVG VIRAAVVMLT TGEKKQGAST
ITMQVARNFF LTRDKTIIRK VKEIFISYHI EQLLTKDEIL ELYVNRIYLG QRAYGVGAAA
QVYFGKNVQD LSLSEMSMIA GLPKAPSTLN PITSHSRALA RRNVVLMRMN EVGYINQTEY
QLALQEPLVA KYHGAEIDLY APYISEMARD YMVQKYGEEE AYTNGYNVYT TISSDLQLLA
QQALRNNVYA YDERHGYRGA AAVLWTGTRP DNTQIQAELA KITPVQELHP AAVLGLNGQQ
ASVLTAKGET KVINWDGLKW ARKFITDKRQ GSVPKTAADV LNVGERIWIR DNGQYLQLSQ
VPEVASATVS LDPQNGAIRT LVGGYSFSQS QYNRVTQAKR QLGSNIKPFI YAAALEKGFT
LATLINNAPI NKPDISQGTA WRPKNSPDIY GGPTRLRVGL AQSINVMSVR AMRHIGLDAA
IAELVKFGFN PNDLPRNESL ALGSPSVTPL QVSTAFNVFA NGGYLVEPFY IDRVEDSFGN
VIEKANPTLA CKPSNTAAPQ SNDPMNFGNA DLATDEPIAY CFGQTGRYAP QIISEQVAFL
ITEALKSVIW GGGDWSKGTG WQGTAWRAAQ LIKRHDIAGK TGTTNESRDT WFSGFSPALT
STFWVGFDDH GRQLGRTAWN ANGEKDQITG AEAGAKTAGP GWNEFMNGVL KGTPEATLIP
PEGIVSVRID LATGKLTRKT DYTSAFEYFI SGTEPKEYIS ETQDENSLFI ESPTDDLFQ
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